Parental gene:

CHP1, ENSCAFG00000009525

Aliases:None
Description:calcineurin-like EF-hand protein 1 [Source:HGNC Symbol;Acc:17433]
Organism:Dog (Canis familiaris)
Coordinates:30:8304655..8350867(+)


>ENSCAFG00000009525
ATGGGTTCTCGGGCTTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACTGGCTTTTCCCACAGTCA
GATCACCCGCCTCTACAGCCGGTTCACCAGCCTGGACAAAGGAGAGAACGGGACTCTCAGCCGGGAAGATTTCCAGCGAA
TTCCGGAACTTGCCATCAACCCACTGGGGGACCGGATCATTAATGCCTTCTTTCCAGAGGGAGAGGACCAGGTAAACTTC
CGTGGATTCATGAGAACTTTGGCTCATTTTCGACCCATTGAGGATAATGAAAAAAGCAAAGATGTGAATGGACCAGAGCC
ACTCAATAGCCGAAGCAACAAACTGCACTTTGCTTTTCGACTCTATGACTTGGATAAAGATGACAAGATTTCCCGTGATG
AACTGTTACAGGTGCTACGTATGATGGTCGGAGTAAATATCTCAGATGAGCAGCTAGGCAGCATTGCAGACAGGACCATC
CAGGAGGCTGATCAGGATGGAGACAGCGCCATATCTTTCACAGAATTTGTTAAGGTTTTGGAGAAAGTAGACGTAGAACA
GAAAATGAGCATCCGATTTCTTCACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 28 .39 RPM
SRP017611_brain 56 .92 RPM
SRP017611_kidney 26 .88 RPM
SRP017611_liver 10 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000010577 ortholog_one2one 2 retrogenes
retro_cpor_1224, retro_cpor_726,
Homo sapiens ENSG00000187446 ortholog_one2one 2 retrogenes
retro_hsap_3334, retro_hsap_3541,
Gorilla gorilla ENSGGOG00000007312 ortholog_one2one 2 retrogenes
retro_ggor_1293, retro_ggor_2392,
Macaca mulatta ENSMMUG00000017092 ortholog_one2one 2 retrogenes
retro_mmul_1809, retro_mmul_2088,
Mus musculus ENSMUSG00000014077 ortholog_one2one 4 retrogenes
retro_mmus_1458, retro_mmus_2094, retro_mmus_3133, retro_mmus_3469,
Nomascus leucogenys ENSNLEG00000003465 ortholog_one2one 4 retrogenes
retro_nleu_1678, retro_nleu_2269, retro_nleu_2608, retro_nleu_2609,
Procavia capensis ENSPCAG00000005419 ortholog_one2one 1 retrogene
retro_pcap_240,
Pongo abelii ENSPPYG00000006370 ortholog_one2one 2 retrogenes
retro_pabe_2749, retro_pabe_2925,
Pan troglodytes ENSPTRG00000006942 ortholog_one2one 2 retrogenes
retro_ptro_2144, retro_ptro_2407,
Rattus norvegicus ENSRNOG00000004742 ortholog_one2one 2 retrogenes
retro_rnor_2034, retro_rnor_2223,
Ictidomys tridecemlineatus ENSSTOG00000014503 ortholog_one2one 1 retrogene
retro_itri_227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2136 69.43 79.49
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000009525 retrocopies