Parental gene:

CHP, ENSMMUG00000017092

Aliases:None
Description:calcium-binding protein p22 [Source:RefSeq peptide;Acc:NP_001253300]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:19620310..19664728(+)


>ENSMMUG00000017092
ATGGGTTCTCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACCGGCTTTTCCCACAGTCA
AATCACTCGCCTCTACAGCCGGTTCACCAGCCTGGACAAAGGAGAGAACGGGACTCTCAGCCGGGAAGATTTCCAGAGGA
TTCCAGAACTTGCCATCAACCCACTAGGGGACCGGATCATCAATGCCTTCTTTCCAGAGGGAGAGGACCAGGTAAACTTC
CGTGGATTCATGCGAACTTTGGCTCATTTCCGCCCCATTGAGGATAATGAAAAGAGCAAAGATGTGAATGGACCCGAACC
ACTCAACAGCCGAAGCAACAAACTGCACTTTGCTTTTCGACTGTATGATTTGGATAAAGATGAAAAGATCTCCCGTGATG
AGCTGTTACAGGTGCTACGCATGATGGTCGGAGTAAATATCTCAGATGAGCAGCTGGGCAGCATCGCAGACAGGACCATT
CAGGAGGCTGATCAGGATGGGGACAGTGCCATATCTTTCACAGAATTTGTTAAGGTTTTGGAGAAGGTGGATGTAGAACA
GAAAATGAGCATCCGATTTCTTCACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 61 .80 RPM
SRP007412_brain 54 .34 RPM
SRP007412_cerebellum 20 .53 RPM
SRP007412_heart 23 .79 RPM
SRP007412_kidney 30 .40 RPM
SRP007412_liver 25 .53 RPM
SRP007412_testis 19 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009525 ortholog_one2one 1 retrogene
retro_cfam_2136,
Cavia porcellus ENSCPOG00000010577 ortholog_one2one 2 retrogenes
retro_cpor_1224, retro_cpor_726,
Homo sapiens ENSG00000187446 ortholog_one2one 2 retrogenes
retro_hsap_3334, retro_hsap_3541,
Gorilla gorilla ENSGGOG00000007312 ortholog_one2one 2 retrogenes
retro_ggor_1293, retro_ggor_2392,
Macaca mulatta ENSMMUG00000017460 within_species_paralog 1 retrogene
retro_mmul_1141,
Mus musculus ENSMUSG00000014077 ortholog_one2one 4 retrogenes
retro_mmus_1458, retro_mmus_2094, retro_mmus_3133, retro_mmus_3469,
Nomascus leucogenys ENSNLEG00000003465 ortholog_one2one 4 retrogenes
retro_nleu_1678, retro_nleu_2269, retro_nleu_2608, retro_nleu_2609,
Procavia capensis ENSPCAG00000005419 ortholog_one2one 1 retrogene
retro_pcap_240,
Pongo abelii ENSPPYG00000006370 ortholog_one2one 2 retrogenes
retro_pabe_2749, retro_pabe_2925,
Pan troglodytes ENSPTRG00000006942 ortholog_one2one 2 retrogenes
retro_ptro_2144, retro_ptro_2407,
Rattus norvegicus ENSRNOG00000004742 ortholog_one2one 2 retrogenes
retro_rnor_2034, retro_rnor_2223,
Ictidomys tridecemlineatus ENSSTOG00000014503 ortholog_one2one 1 retrogene
retro_itri_227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1809 85.16 65.64
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_2088 83.16 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000017092 retrocopies