Parental gene:

Chp, ENSRNOG00000004742

Aliases:Chp1, Chp, Wrch2
Description:Calcineurin B homologous protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P61023]
Organism:Rat (Rattus norvegicus)
Coordinates:3:117902987..117938471(+)


>ENSRNOG00000004742
ATGGGGTCTCGGGCCTCCACGTTACTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACTGGCTTTTCCCACAGTCA
GATCACACGCCTGTACAGCCGCTTCACCAGCCTGGACAAAGGGGAGAACGGAACTCTCAGCCGGGAAGATTTCCAGAGGA
TTCCAGAACTTGCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTTCTCAGAGGGAGAGGATCAGGTAAACTTC
CGAGGATTCATGAGAACTTTGGCTCATTTCCGACCCATTGAGGATAACGAAAAGAGCAAAGATGTGAATGGACCGGAACC
CCTCAACAGCCGGAGCAACAAACTGCACTTTGCTTTCAGACTTTATGACTTGGATAAAGATGACAAGATCTCCCGCGATG
AGCTGTTACAGGTACTGCGAATGATGGTCGGAGTGAATATCTCAGATGAGCAGCTGGGCAGTATTGCAGACAGGACCATC
CAGGAGGCTGACCAAGATGGAGACAGTGCCATATCTTTTACAGAATTTGTTAAGGTTTTGGAGAAGGTGGATGTAGAACA
GAAGATGAGCATCCGATTTCTTCACTAA

Library Parental gene expression (RPM)
SRP017611_liver 28 .64 RPM
SRP017611_kidney 42 .78 RPM
SRP017611_brain 39 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009525 ortholog_one2one 1 retrogene
retro_cfam_2136,
Cavia porcellus ENSCPOG00000010577 ortholog_one2one 2 retrogenes
retro_cpor_1224, retro_cpor_726,
Homo sapiens ENSG00000187446 ortholog_one2one 2 retrogenes
retro_hsap_3334, retro_hsap_3541,
Gorilla gorilla ENSGGOG00000007312 ortholog_one2one 2 retrogenes
retro_ggor_1293, retro_ggor_2392,
Macaca mulatta ENSMMUG00000017092 ortholog_one2one 2 retrogenes
retro_mmul_1809, retro_mmul_2088,
Mus musculus ENSMUSG00000014077 ortholog_one2one 4 retrogenes
retro_mmus_1458, retro_mmus_2094, retro_mmus_3133, retro_mmus_3469,
Nomascus leucogenys ENSNLEG00000003465 ortholog_one2one 4 retrogenes
retro_nleu_1678, retro_nleu_2269, retro_nleu_2608, retro_nleu_2609,
Procavia capensis ENSPCAG00000005419 ortholog_one2one 1 retrogene
retro_pcap_240,
Pongo abelii ENSPPYG00000006370 ortholog_one2one 2 retrogenes
retro_pabe_2749, retro_pabe_2925,
Pan troglodytes ENSPTRG00000006942 ortholog_one2one 2 retrogenes
retro_ptro_2144, retro_ptro_2407,
Rattus norvegicus ENSRNOG00000043210 within_species_paralog 1 retrogene
retro_rnor_1932,
Ictidomys tridecemlineatus ENSSTOG00000014503 ortholog_one2one 1 retrogene
retro_itri_227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_2034 99.49 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_2223 99.49 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000004742 retrocopies