Parental gene: | Chp1, ENSMUSG00000014077 |
| Aliases: | Chp1, 1500003O03Rik, AA960066, AI046351, Cahp, Chp, Sid470p, p24, vac |
| Description: | calcineurin-like EF hand protein 1 [Source:MGI Symbol;Acc:MGI:1927185] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:119547696..119587027(+) |
>ENSMUSG00000014077
ATGGGGTCTCGGGCCTCCACGTTATTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACTGGCTTTTCCCACAGTCA
GATCACGCGCCTGTACAGCCGCTTCACCAGCCTGGACAAAGGGGAGAACGGGACTCTCAGCCGGGAAGATTTCCAGAGGA
TTCCAGAACTTGCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTTCTCAGAGGGAGAGGATCAGGTAAACTTC
CGAGGATTCATGAGAACATTGGCTCATTTCCGACCCATTGAGGATAACGAAAAGAGCAAAGATGTGAATGGCCCGGAACC
CCTCAACAGCCGGAGCAACAAGCTGCACTTTGCTTTCAGACTCTATGATTTGGATAAAGATGACAAGATCTCCCGTGATG
AGCTGTTACAGGTACTGCGAATGATGGTTGGAGTGAATATCTCGGATGAGCAGCTGGGCAGTATTGCGGACAGGACCATC
CAGGAGGCTGACCAAGATGGAGATAGTGCCATATCTTTTACAGAATTCGTTAAGGTTTTGGAAAAAGTGGATGTAGAACA
GAAGATGAGCATCCGATTTCTTCACTAA
ATGGGGTCTCGGGCCTCCACGTTATTGCGGGACGAAGAGCTCGAGGAGATCAAGAAGGAGACTGGCTTTTCCCACAGTCA
GATCACGCGCCTGTACAGCCGCTTCACCAGCCTGGACAAAGGGGAGAACGGGACTCTCAGCCGGGAAGATTTCCAGAGGA
TTCCAGAACTTGCCATCAACCCACTGGGGGACCGGATCATCAATGCCTTCTTCTCAGAGGGAGAGGATCAGGTAAACTTC
CGAGGATTCATGAGAACATTGGCTCATTTCCGACCCATTGAGGATAACGAAAAGAGCAAAGATGTGAATGGCCCGGAACC
CCTCAACAGCCGGAGCAACAAGCTGCACTTTGCTTTCAGACTCTATGATTTGGATAAAGATGACAAGATCTCCCGTGATG
AGCTGTTACAGGTACTGCGAATGATGGTTGGAGTGAATATCTCGGATGAGCAGCTGGGCAGTATTGCGGACAGGACCATC
CAGGAGGCTGACCAAGATGGAGATAGTGCCATATCTTTTACAGAATTCGTTAAGGTTTTGGAAAAAGTGGATGTAGAACA
GAAGATGAGCATCCGATTTCTTCACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 107 .07 RPM |
| SRP007412_cerebellum | 72 .47 RPM |
| SRP007412_heart | 68 .24 RPM |
| SRP007412_kidney | 111 .34 RPM |
| SRP007412_liver | 243 .29 RPM |
| SRP007412_testis | 16 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000009525 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000010577 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000187446 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000007312 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000017092 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003465 | ortholog_one2one | 4 retrogenes | |
| Procavia capensis | ENSPCAG00000005419 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006370 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000006942 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000004742 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014503 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1458 | 96.77 | 79.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2094 | 52.70 | 74.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3133 | 68.50 | 64.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_3469 | 82.47 | 99.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000014077 retrocopies