Parental gene: | ENSCHOG00000004467 |
| Aliases: | None |
| Description: | None |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_7626:1683..21113(+) |
>ENSCHOG00000004467
GTAATTGGTACACCTCAGAGACCTGCAGCGCCAAATACTATCCTGGTAGGAAGTCCACACACCCCTAACACACACTTTGT
ATCACAGAACCAGGCTTCAGACTCCTCACCTTGGTCTGCTGGGAAACGCAACAGAAAAGGAGAGAAGAATGGCAAGGGCC
TGAGGCATTTTTCAATGAAGGTTTGTGAGAAGGTTCAGCGGAAAGGAACCACTTCCTATAACGAAGTGGCAGATGAACTG
GTGGCGGAGTTCAGTGCTGCTGATAACCATATTTTACCAAATGAATCAGCTTATGACCAGAAGAATATAAGACGACGAGT
CTATGATGCCTTAAATGTCTTAATGGCCATGAACATTATCTCTAAGGAGAAGAAAGAAATCAAATGGATTGGTCTGCCTA
CAAACTCGGCTCAGGAATGTCAGAATTTAGAGGTAGAGAGACAGAGAAGACTTGAAAGAATAAAACAGAAACAGTCTCAA
CTTCAAGAACTTATTCTACAGCAAATTGCCTTCAAGAATTTGGTGCAGAGAAACCGCCAAGCAGAGCAGCAAGCGAACCG
GCCCCCTCCCTCCAACTCCGTCATCCACCTCCCATTCATCATCGTGAACACCAGCAAGAAGACCGTGATCGACTGCAGTA
TTTCTAACGACAAATTTGAGTATCTGTTTAATTTTGACAACACGTTTGAAATCCATGATGACATAGAAGTATTAAAGCGA
ATGGGAATGGCTTGTGGATTAGAATCAGGAAGCTGTTCTGCCGACCTTATGGCAAGAAGTTTGGTACCTAAAGCTCTGGA
ACCTTATGTGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACATCATCAGGTTCAACTTCAAATGGCACAA
GGCTTTCTGCCAGTGACTTGACCAACGGTGCAGATGGGACATTAGCCACAAGTTCCAGCGGGTCTCAGTACAGCGGCTCC
AGGGTGGAGACGCCCGTGTCTTATGTCGGGGAAGATGATGATGACGACGATGACTTTAACGAAAATGATGATGAAGACTG
A
GTAATTGGTACACCTCAGAGACCTGCAGCGCCAAATACTATCCTGGTAGGAAGTCCACACACCCCTAACACACACTTTGT
ATCACAGAACCAGGCTTCAGACTCCTCACCTTGGTCTGCTGGGAAACGCAACAGAAAAGGAGAGAAGAATGGCAAGGGCC
TGAGGCATTTTTCAATGAAGGTTTGTGAGAAGGTTCAGCGGAAAGGAACCACTTCCTATAACGAAGTGGCAGATGAACTG
GTGGCGGAGTTCAGTGCTGCTGATAACCATATTTTACCAAATGAATCAGCTTATGACCAGAAGAATATAAGACGACGAGT
CTATGATGCCTTAAATGTCTTAATGGCCATGAACATTATCTCTAAGGAGAAGAAAGAAATCAAATGGATTGGTCTGCCTA
CAAACTCGGCTCAGGAATGTCAGAATTTAGAGGTAGAGAGACAGAGAAGACTTGAAAGAATAAAACAGAAACAGTCTCAA
CTTCAAGAACTTATTCTACAGCAAATTGCCTTCAAGAATTTGGTGCAGAGAAACCGCCAAGCAGAGCAGCAAGCGAACCG
GCCCCCTCCCTCCAACTCCGTCATCCACCTCCCATTCATCATCGTGAACACCAGCAAGAAGACCGTGATCGACTGCAGTA
TTTCTAACGACAAATTTGAGTATCTGTTTAATTTTGACAACACGTTTGAAATCCATGATGACATAGAAGTATTAAAGCGA
ATGGGAATGGCTTGTGGATTAGAATCAGGAAGCTGTTCTGCCGACCTTATGGCAAGAAGTTTGGTACCTAAAGCTCTGGA
ACCTTATGTGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACATCATCAGGTTCAACTTCAAATGGCACAA
GGCTTTCTGCCAGTGACTTGACCAACGGTGCAGATGGGACATTAGCCACAAGTTCCAGCGGGTCTCAGTACAGCGGCTCC
AGGGTGGAGACGCCCGTGTCTTATGTCGGGGAAGATGATGATGACGACGATGACTTTAACGAAAATGATGATGAAGACTG
A
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006950 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000198176 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004908 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000007927 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012165 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007423 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000038482 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000849 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003532 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025889 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_506 | 60.64 | 53.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_529 | 90.58 | 94.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_837 | 70.77 | 55.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_854 | 85.16 | 73.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_895 | 80.00 | 75.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_2187 | 92.86 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_2229 | 81.71 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_2621 | 79.83 | 65.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000004467 retrocopies