Parental gene:

ENSCHOG00000004467

Aliases:None
Description:None
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_7626:1683..21113(+)


>ENSCHOG00000004467
GTAATTGGTACACCTCAGAGACCTGCAGCGCCAAATACTATCCTGGTAGGAAGTCCACACACCCCTAACACACACTTTGT
ATCACAGAACCAGGCTTCAGACTCCTCACCTTGGTCTGCTGGGAAACGCAACAGAAAAGGAGAGAAGAATGGCAAGGGCC
TGAGGCATTTTTCAATGAAGGTTTGTGAGAAGGTTCAGCGGAAAGGAACCACTTCCTATAACGAAGTGGCAGATGAACTG
GTGGCGGAGTTCAGTGCTGCTGATAACCATATTTTACCAAATGAATCAGCTTATGACCAGAAGAATATAAGACGACGAGT
CTATGATGCCTTAAATGTCTTAATGGCCATGAACATTATCTCTAAGGAGAAGAAAGAAATCAAATGGATTGGTCTGCCTA
CAAACTCGGCTCAGGAATGTCAGAATTTAGAGGTAGAGAGACAGAGAAGACTTGAAAGAATAAAACAGAAACAGTCTCAA
CTTCAAGAACTTATTCTACAGCAAATTGCCTTCAAGAATTTGGTGCAGAGAAACCGCCAAGCAGAGCAGCAAGCGAACCG
GCCCCCTCCCTCCAACTCCGTCATCCACCTCCCATTCATCATCGTGAACACCAGCAAGAAGACCGTGATCGACTGCAGTA
TTTCTAACGACAAATTTGAGTATCTGTTTAATTTTGACAACACGTTTGAAATCCATGATGACATAGAAGTATTAAAGCGA
ATGGGAATGGCTTGTGGATTAGAATCAGGAAGCTGTTCTGCCGACCTTATGGCAAGAAGTTTGGTACCTAAAGCTCTGGA
ACCTTATGTGACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACATCATCAGGTTCAACTTCAAATGGCACAA
GGCTTTCTGCCAGTGACTTGACCAACGGTGCAGATGGGACATTAGCCACAAGTTCCAGCGGGTCTCAGTACAGCGGCTCC
AGGGTGGAGACGCCCGTGTCTTATGTCGGGGAAGATGATGATGACGACGATGACTTTAACGAAAATGATGATGAAGACTG
A

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006950 ortholog_one2many 2 retrogenes
retro_cjac_179, retro_cjac_4094,
Homo sapiens ENSG00000198176 ortholog_one2many 4 retrogenes
retro_hsap_1601, retro_hsap_299, retro_hsap_4803, retro_hsap_61,
Gorilla gorilla ENSGGOG00000004908 ortholog_one2many 2 retrogenes
retro_ggor_17, retro_ggor_335,
Loxodonta africana ENSLAFG00000007927 ortholog_one2many 1 retrogene
retro_lafr_914,
Myotis lucifugus ENSMLUG00000012165 ortholog_one2one 1 retrogene
retro_mluc_896,
Macaca mulatta ENSMMUG00000007423 ortholog_one2many 1 retrogene
retro_mmul_177,
Mus musculus ENSMUSG00000038482 ortholog_one2one 2 retrogenes
retro_mmus_3243, retro_mmus_338,
Nomascus leucogenys ENSNLEG00000000849 ortholog_one2many 3 retrogenes
retro_nleu_2177, retro_nleu_2598, retro_nleu_49,
Otolemur garnettii ENSOGAG00000003532 ortholog_one2one 1 retrogene
retro_ogar_3334,
Pongo abelii ENSPPYG00000025889 ortholog_one2many 3 retrogenes
retro_pabe_1314, retro_pabe_132, retro_pabe_378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_506 60.64 53.18
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2. retro_chof_529 90.58 94.51
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3. retro_chof_837 70.77 55.20
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4. retro_chof_854 85.16 73.41
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5. retro_chof_895 80.00 75.72
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6. retro_chof_2187 92.86 100.00
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7. retro_chof_2229 81.71 100.00
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8. retro_chof_2621 79.83 65.90
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Download FASTA sequences of all ENSCHOG00000004467 retrocopies