Parental gene: | Tfdp1, ENSMUSG00000038482 |
| Aliases: | Tfdp1, Dp1, Drtf1 |
| Description: | transcription factor Dp 1 [Source:MGI Symbol;Acc:MGI:101934] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:13339673..13377702(+) |
>ENSMUSG00000038482
ATGGCAAAAGATGCCAGTCTAATTGAAGCCAACGGAGAACTAAAGGTCTTTATAGACCAGAATCTTAGTCCTGGGAAAGG
TGTGGTATCTCTTGTAGCCGTCCACCCGTCCACAGTCAACACACTTGGGAAGCAGCTTTTGCCAAAAACCTTCGGACAGT
CCAATGTCAATATCACACAGCAAGTGGTGATTGGCACGCCTCAGAGACCGGCAGCATCCAACACTATTGTGGTAGGAAGC
CCACACACTCCCAACACGCATTTTGTGTCACAGAACCAGACGTCTGACTCCTCACCTTGGTCTGCTGGGAAGCGGAACAG
GAAGGGCGAGAAGAATGGCAAGGGCCTGCGGCATTTCTCCATGAAGGTGTGTGAGAAGGTGCAGAGGAAAGGAACCACCT
CCTACAATGAGGTGGCTGACGAGCTGGTGGCAGAGTTCAGCGCTGCCGACAACCACATTCTACCAAACGAATCAGCTTAT
GACCAGAAGAACATCCGGCGGCGTGTCTACGATGCCTTAAATGTGCTAATGGCCATGAACATCATCTCCAAGGAGAAGAA
GGAGATCAAATGGATCGGCCTGCCCACCAACTCAGCTCAGGAGTGCCAGAACTTAGAGGTAGAGAGGCAGAGGAGGCTGG
AGAGGATCAAACAGAAGCAGTCACAGCTCCAGGAGCTCATCCTGCAGCAAATTGCCTTCAAGAACTTGGTGCAGAGAAAT
CGCCAAGCTGAGCAGCAGGCCCGCAGGCCGCCTCCTCCCAACTCTGTCATCCACTTGCCCTTCATCATTGTCAACACCAG
CAGGAAGACAGTCATTGACTGCAGCATCTCCAATGACAAATTTGAGTATCTGTTTAACTTTGACAACACGTTTGAGATCC
ACGATGACATTGAGGTGCTCAAGCGCATGGGCATGGCATGTGGGCTGGAGTCTGGCAACTGCTCTGCTGAAGACCTCAAG
GTGGCCAGAAGTTTGGTACCAAAAGCTCTAGAACCATACGTGACAGAAATGGCTCAGGGATCCATTGGTGGAGTATTCGT
CACGACAACAGGTTCTACATCCAATGGCACAAGGCTTTCTGCCAGTGATTTGAGCAATGGTGCAGATGGGATGCTGGCCA
CGAGCTCCAATGGGTCTCAGTACAGCGGCTCCAGGGTCGAGACCCCTGTGTCCTACGTTGGGGAGGATGATGACGACGAT
GATGACTTTAATGAGAACGACGAGGAGGATTGA
ATGGCAAAAGATGCCAGTCTAATTGAAGCCAACGGAGAACTAAAGGTCTTTATAGACCAGAATCTTAGTCCTGGGAAAGG
TGTGGTATCTCTTGTAGCCGTCCACCCGTCCACAGTCAACACACTTGGGAAGCAGCTTTTGCCAAAAACCTTCGGACAGT
CCAATGTCAATATCACACAGCAAGTGGTGATTGGCACGCCTCAGAGACCGGCAGCATCCAACACTATTGTGGTAGGAAGC
CCACACACTCCCAACACGCATTTTGTGTCACAGAACCAGACGTCTGACTCCTCACCTTGGTCTGCTGGGAAGCGGAACAG
GAAGGGCGAGAAGAATGGCAAGGGCCTGCGGCATTTCTCCATGAAGGTGTGTGAGAAGGTGCAGAGGAAAGGAACCACCT
CCTACAATGAGGTGGCTGACGAGCTGGTGGCAGAGTTCAGCGCTGCCGACAACCACATTCTACCAAACGAATCAGCTTAT
GACCAGAAGAACATCCGGCGGCGTGTCTACGATGCCTTAAATGTGCTAATGGCCATGAACATCATCTCCAAGGAGAAGAA
GGAGATCAAATGGATCGGCCTGCCCACCAACTCAGCTCAGGAGTGCCAGAACTTAGAGGTAGAGAGGCAGAGGAGGCTGG
AGAGGATCAAACAGAAGCAGTCACAGCTCCAGGAGCTCATCCTGCAGCAAATTGCCTTCAAGAACTTGGTGCAGAGAAAT
CGCCAAGCTGAGCAGCAGGCCCGCAGGCCGCCTCCTCCCAACTCTGTCATCCACTTGCCCTTCATCATTGTCAACACCAG
CAGGAAGACAGTCATTGACTGCAGCATCTCCAATGACAAATTTGAGTATCTGTTTAACTTTGACAACACGTTTGAGATCC
ACGATGACATTGAGGTGCTCAAGCGCATGGGCATGGCATGTGGGCTGGAGTCTGGCAACTGCTCTGCTGAAGACCTCAAG
GTGGCCAGAAGTTTGGTACCAAAAGCTCTAGAACCATACGTGACAGAAATGGCTCAGGGATCCATTGGTGGAGTATTCGT
CACGACAACAGGTTCTACATCCAATGGCACAAGGCTTTCTGCCAGTGATTTGAGCAATGGTGCAGATGGGATGCTGGCCA
CGAGCTCCAATGGGTCTCAGTACAGCGGCTCCAGGGTCGAGACCCCTGTGTCCTACGTTGGGGAGGATGATGACGACGAT
GATGACTTTAATGAGAACGACGAGGAGGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 24 .74 RPM |
| SRP007412_cerebellum | 24 .45 RPM |
| SRP007412_heart | 14 .88 RPM |
| SRP007412_kidney | 15 .13 RPM |
| SRP007412_liver | 12 .32 RPM |
| SRP007412_testis | 27 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004467 | ortholog_one2one | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006950 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000198176 | ortholog_one2many | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000004908 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000007927 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012165 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007423 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000849 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003532 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025889 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_338 | 88.71 | 92.20 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3243 | 97.03 | 65.61 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000038482 retrocopies