Parental gene: | PLA2G12A, ENSDNOG00000016573 |
| Aliases: | None |
| Description: | phospholipase A2, group XIIA [Source:HGNC Symbol;Acc:18554] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_37:177658..191190(-) |
>ENSDNOG00000016573
ATGGCTGTGCTTCCGCGGCCCGCGCTCGCCCTCCTGCTCTTGGCGGCCGCCCTGAGCTGCCAGGGGGAGGCCCAGACCAC
CGACTGGAGGACCACCCTTAAGACCATCCGGAACGGCGTGCACAAGATAGACACGTACCTGAACGCCGCCTTGGACCTCC
TTGGAGGCGAGGACGGGCTCTGTCAGTACAAGTGCAGTGACGGATCTAAGCCTTTCCCACATTATGATTATAAACCCTCA
CCACCGAATGGATGTGGCTCTCCGATGTTTGGTGTTCATCTTAACATTGGCATCCCTTCCCTGACAAAGTGCTGCAACCA
ACATGACAGGTGCTATGAGACCTGTGGCAAAAGCAAGAATGACTGTGATGAGGAGTTCCAGTATTGCCTCTCCAAGATCT
GCCGAAATGTGCAGAAAACACTAGGACTAGCTCAGCATGTTCAAGCATGTGAAACTACAGTGGAGCTCTTGTTTGGCAGT
GTTATACATTTAGGCTGTAAGCCATACCTGGACAGCCAAAGAGCCGCATGCAGGTGTCGTTATGAAGAAAAAACTGATCT
CTAA
ATGGCTGTGCTTCCGCGGCCCGCGCTCGCCCTCCTGCTCTTGGCGGCCGCCCTGAGCTGCCAGGGGGAGGCCCAGACCAC
CGACTGGAGGACCACCCTTAAGACCATCCGGAACGGCGTGCACAAGATAGACACGTACCTGAACGCCGCCTTGGACCTCC
TTGGAGGCGAGGACGGGCTCTGTCAGTACAAGTGCAGTGACGGATCTAAGCCTTTCCCACATTATGATTATAAACCCTCA
CCACCGAATGGATGTGGCTCTCCGATGTTTGGTGTTCATCTTAACATTGGCATCCCTTCCCTGACAAAGTGCTGCAACCA
ACATGACAGGTGCTATGAGACCTGTGGCAAAAGCAAGAATGACTGTGATGAGGAGTTCCAGTATTGCCTCTCCAAGATCT
GCCGAAATGTGCAGAAAACACTAGGACTAGCTCAGCATGTTCAAGCATGTGAAACTACAGTGGAGCTCTTGTTTGGCAGT
GTTATACATTTAGGCTGTAAGCCATACCTGGACAGCCAAAGAGCCGCATGCAGGTGTCGTTATGAAGAAAAAACTGATCT
CTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 14 .59 RPM |
| SRP012922_cerebellum | 14 .30 RPM |
| SRP012922_heart | 3 .94 RPM |
| SRP012922_kidney | 12 .87 RPM |
| SRP012922_liver | 18 .73 RPM |
| SRP012922_lung | 9 .77 RPM |
| SRP012922_quadricep_muscle | 10 .56 RPM |
| SRP012922_spleen | 13 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015230 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016169 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000123739 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001082 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000000852 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000008637 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027999 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004686 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000014505 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000016362 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000009139 | ortholog_one2one | 3 retrogenes | |
| Tarsius syrichta | ENSTSYG00000004756 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000009842 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_172 | 72.53 | 95.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_434 | 58.20 | 64.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1694 | 62.30 | 95.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1856 | 93.33 | 64.17 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1930 | 96.64 | 63.10 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_2286 | 80.00 | 69.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_dnov_2572 | 99.12 | 60.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000016573 retrocopies