Parental gene: | PLA2G12A, ENSSSCG00000009139 |
| Aliases: | None |
| Description: | phospholipase A2, group XIIA [Source:HGNC Symbol;Acc:18554] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 8:120566786..120596415(+) |
>ENSSSCG00000009139
ATGGCCCAGCTCCCGCGGCCCGCGCTCGCCCTCCTCCTCCTGCTACTGACCGCGGCTTTCAGATGCCAGGAGCAGGCCCA
GCCCACCGATTGGAGGGCCACCCTGAAGACCATCCGGAACGGCGTTCACAAAATAGACACGTACCTCAACGCCGCCTTGG
ACCTTCTGGGAGGAGAGGATGGGCTCTGCCAGTATAAGTGCAATGACGGATCTAAGCCTTTCCCACGTTATGGATATAAA
CCCTCCCCACCGAATGGATGTGGCTCCCCACTCTTTGGTGTTCATCTTAACATCGGCATCCCTTCCCTGACAAAGTGCTG
CAACCAGCACGACAGGTGCTATGAGACCTGCGGCAAAAGCAAAAATGACTGTGATGAGGAGTTCCAGTATTGCCTCTCCA
AAATCTGCCGAGACGTGCAGAAAACACTAGGACTAGCTCAGCATATCCAGGCCTGTGAAACCACAGTGGAGCTCTTGTTT
GACAGTGTTATACATCTAGGCTGTAAACCATACCTGGACAGCCAACGAGCTGCATGTAGATGTCGCTACCAAGAAAAAAC
CGATCTTTAA
ATGGCCCAGCTCCCGCGGCCCGCGCTCGCCCTCCTCCTCCTGCTACTGACCGCGGCTTTCAGATGCCAGGAGCAGGCCCA
GCCCACCGATTGGAGGGCCACCCTGAAGACCATCCGGAACGGCGTTCACAAAATAGACACGTACCTCAACGCCGCCTTGG
ACCTTCTGGGAGGAGAGGATGGGCTCTGCCAGTATAAGTGCAATGACGGATCTAAGCCTTTCCCACGTTATGGATATAAA
CCCTCCCCACCGAATGGATGTGGCTCCCCACTCTTTGGTGTTCATCTTAACATCGGCATCCCTTCCCTGACAAAGTGCTG
CAACCAGCACGACAGGTGCTATGAGACCTGCGGCAAAAGCAAAAATGACTGTGATGAGGAGTTCCAGTATTGCCTCTCCA
AAATCTGCCGAGACGTGCAGAAAACACTAGGACTAGCTCAGCATATCCAGGCCTGTGAAACCACAGTGGAGCTCTTGTTT
GACAGTGTTATACATCTAGGCTGTAAACCATACCTGGACAGCCAACGAGCTGCATGTAGATGTCGCTACCAAGAAAAAAC
CGATCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 44 .73 RPM |
| SRP014902_testis | 38 .33 RPM |
| SRP018856_adipose | 20 .77 RPM |
| SRP018288_kidney | 25 .32 RPM |
| SRP018288_lung | 25 .66 RPM |
| SRP018288_liver | 28 .30 RPM |
| SRP018288_heart | 36 .57 RPM |
| SRP035408_liver | 27 .24 RPM |
| SRP035408_brain | 25 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000015230 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016169 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000016573 | ortholog_one2one | 7 retrogenes | |
| Homo sapiens | ENSG00000123739 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001082 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000000852 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000008637 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027999 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004686 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000014505 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000016362 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004756 | ortholog_one2one | 4 retrogenes | |
| Vicugna pacos | ENSVPAG00000009842 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_622 | 62.09 | 95.24 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_sscr_623 | 61.33 | 94.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_sscr_670 | 66.48 | 95.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000009139 retrocopies