Parental gene:

TSEN15, ENSDNOG00000017611

Aliases:None
Description:tRNA splicing endonuclease 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16791]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_7067:46640..94935(+)


>ENSDNOG00000017611
ATGGAGGAGCACGGTGATTCCGAGCCGACCCCGGGCTGCAGCGGCATGAGCCGGGGCGGCATACCAGGCGGCGTCGGTGC
CTGCTCGTGGGCCCCCGAGGACGCTTGGATGGGGACTCACCCTAAGTATTTAGAGATGATGGAATTAGATATAGGAGATG
CCACCCAAGTTTATATAGCATTCTTGGTTTACCTGGACCTCATGGAGAGTAAAAGTTGGCATGAAGTAAACTGTGTGGGA
TTACCAGAACTGCAGCTCATCTGCCTTGTTGGTACCGAGATAGAAGGGGAAGGGTTACAGACTGTGGTGCCTACGCCTAT
CAGTGCGTCCCTCAGCCATAACAGGATAAGAGAGATCTTGAAGGCATCCCGAAAATTGCAAGGTGACCCAGATTTGCCGA
TGTCTTTTACTTTGGCCATAGTAGAGTCTGATTCCACAATAGTTTATTATAAACTTACTGATGGATTTATGCTGCCAGAC
CCTCAGAATATTTCACTTAGAAGATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 9 .14 RPM
SRP012922_cerebellum 7 .84 RPM
SRP012922_heart 5 .80 RPM
SRP012922_kidney 7 .12 RPM
SRP012922_liver 4 .18 RPM
SRP012922_lung 7 .79 RPM
SRP012922_quadricep_muscle 3 .63 RPM
SRP012922_spleen 10 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016369 ortholog_one2one 1 retrogene
retro_btau_971,
Callithrix jacchus ENSCJAG00000005356 ortholog_one2one 1 retrogene
retro_cjac_3055,
Homo sapiens ENSG00000198860 ortholog_one2one 1 retrogene
retro_hsap_1721,
Gorilla gorilla ENSGGOG00000015804 ortholog_one2one 2 retrogenes
retro_ggor_2267, retro_ggor_240,
Loxodonta africana ENSLAFG00000014109 ortholog_one2one 1 retrogene
retro_lafr_684,
Macaca mulatta ENSMMUG00000016409 ortholog_one2one 1 retrogene
retro_mmul_1214,
Mustela putorius furo ENSMPUG00000011790 ortholog_one2one 1 retrogene
retro_mputfur_1261,
Mus musculus ENSMUSG00000014980 ortholog_one2one 1 retrogene
retro_mmus_2721,
Nomascus leucogenys ENSNLEG00000018024 ortholog_one2many 1 retrogene
retro_nleu_98,
Otolemur garnettii ENSOGAG00000003128 ortholog_one2one 1 retrogene
retro_ogar_3264,
Pongo abelii ENSPPYG00000000421 ortholog_one2one 4 retrogenes
retro_pabe_1436, retro_pabe_3065, retro_pabe_3196, retro_pabe_469,
Pan troglodytes ENSPTRG00000023202 ortholog_one2one 2 retrogenes
retro_ptro_1229, retro_ptro_147,
Pteropus vampyrus ENSPVAG00000001103 ortholog_one2one 1 retrogene
retro_pvam_1458,
Ictidomys tridecemlineatus ENSSTOG00000013230 ortholog_one2one 2 retrogenes
retro_itri_1538, retro_itri_1849,
Vicugna pacos ENSVPAG00000002941 ortholog_one2one 2 retrogenes
retro_vpac_381, retro_vpac_565,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1176 60.00 94.05
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2. retro_dnov_2529 81.06 76.19
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Download FASTA sequences of all ENSDNOG00000017611 retrocopies