Parental gene: | TSEN15, ENSPPYG00000000421 |
| Aliases: | None |
| Description: | tRNA splicing endonuclease 15 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16791] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 1:66553293..66574434(-) |
>ENSPPYG00000000421
ATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGG
CGGCGGAGCTCCCTCGTGGGCCCCCGAGGACGCCTGGATGGGCACTCACCCTAAGTATTTAGAAATGATGGAATTAGATA
TAGGAGATGCCACCCAAGTTTATGTAGCATTCTTGGTTTACCTGGACCTCATGGAAAGCAAAAGCTGGCATGAAGTAAAC
TGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCC
TACCCCCATCACTGCTTCCCTCAGCCATAACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAATTGCAAGGTGATCCAG
ATTTGCCGATGTCTTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTTATG
CTGCCAGACCCTCAGGTCAGTGTTGAGGTAACTGACAGCAAGAAGTACAAAAAGAGGAAAATTATGACATGA
ATGGAGGAGCGCGGCGATTCCGAGCCGACCCCCGGCTGCAGCGGCCTGGGTCCGGGCGGTGTTCGCGGCTTTGGCGACGG
CGGCGGAGCTCCCTCGTGGGCCCCCGAGGACGCCTGGATGGGCACTCACCCTAAGTATTTAGAAATGATGGAATTAGATA
TAGGAGATGCCACCCAAGTTTATGTAGCATTCTTGGTTTACCTGGACCTCATGGAAAGCAAAAGCTGGCATGAAGTAAAC
TGTGTAGGATTACCAGAACTCCAGCTCATCTGCCTTGTTGGTACTGAGATAGAAGGGGAGGGGTTACAGACTGTGGTGCC
TACCCCCATCACTGCTTCCCTCAGCCATAACAGGATAAGGGAGATCTTGAAGGCATCTCGAAAATTGCAAGGTGATCCAG
ATTTGCCGATGTCTTTTACTTTGGCCATAGTGGAGTCTGATTCTACAATAGTCTATTATAAACTTACTGATGGATTTATG
CTGCCAGACCCTCAGGTCAGTGTTGAGGTAACTGACAGCAAGAAGTACAAAAAGAGGAAAATTATGACATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .83 RPM |
| SRP007412_cerebellum | 1 .09 RPM |
| SRP007412_heart | 0 .81 RPM |
| SRP007412_kidney | 0 .76 RPM |
| SRP007412_liver | 0 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000016369 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005356 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000017611 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000198860 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015804 | ortholog_one2one | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000014109 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016409 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011790 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000014980 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000018024 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003128 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000023202 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000001103 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013230 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000002941 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_469 | 66.98 | 57.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1436 | 86.99 | 71.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_3065 | 73.74 | 53.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_3196 | 73.74 | 53.01 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000000421 retrocopies