Parental gene:

OTUB1, ENSECAG00000002621

Aliases:None
Description:OTU domain, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:23077]
Organism:Horse (Equus caballus)
Coordinates:12:24333117..24339205(+)


>ENSECAG00000002621
CTTCCAGGTGTTAACTGTCTTGCCTATGATGAAGCCATCATGGCTCAGCAGGACCGAATTCAGCAAGAGATTGCTGTGCA
GAACCCTCTGGTCTCGGAGCGGCTGGAGCTGTCGGTCCTGTACAAGGAGTATGCTGAGGATGACAACATCTATCAACAGA
AGATCAAGGACCTCCACAAAAAGTACTCGTACATCCGCAAGACCAGGCCTGATGGCAACTGCTTCTATCGAGCCTTCGGC
TTCTCCCACTTGGAGGCGCTGCTGGACGACAGCAAGGAGCTGCAGCGGTTCAAGGCTGTGTCTGCCAAGAGCAAAGAGGA
CCTGGTGTCCCAGGGCTTCACCGAGTTCACAATTGAGGATTTCCACAATACGTTCATGGACCTGATCGAGCAGGTGGAGA
AGCGGACCTCGGTGGCCGACCTGCTGGCCTCCTTCAACGACCAGAGCACCTCGGACTACCTGGTGGTCTACCTGCGGCTG
CTCACCTCGGGCCACCTGCAGCGCGAGAGCACGTTCTTCGAGCACTTCATCGAGGGCGGCCGGACCGTCAAGGAGTTCTG
CCAGCAGGAGGTGGAGCCCATGTGCAAGGAGAGCGACCACATCCACATCATCGCGCTGGCCCAGGCCCTCAGCGTCTCCA
TCCAGGTGGAGTACATGGACCGCGGCGAGGGCGGCACCACCAACCCGCACATCTTCCCCGAGGGCTCGGAGCCCAAGGTC
TACCTGCTCTACCGGCCCGGACACTACGACATCCTCTACAAATAG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 45 .65 RPM
SRP021940_embryo 81 .73 RPM
SRP021940_cerebellum 103 .09 RPM
SRP021940_testis 202 .64 RPM
SRP021940_placental_villous 52 .49 RPM
SRP021940_articular_cartilage 21 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018084 ortholog_one2one 1 retrogene
retro_amel_1270,
Bos taurus ENSBTAG00000003967 ortholog_one2one 1 retrogene
retro_btau_1119,
Canis familiaris ENSCAFG00000014729 ortholog_one2one 2 retrogenes
retro_cfam_1376, retro_cfam_2023,
Myotis lucifugus ENSMLUG00000012235 ortholog_one2many 2 retrogenes
retro_mluc_1257, retro_mluc_614,
Mustela putorius furo ENSMPUG00000013314 ortholog_one2one 1 retrogene
retro_mputfur_1057,
Pteropus vampyrus ENSPVAG00000017099 ortholog_one2one 2 retrogenes
retro_pvam_131, retro_pvam_274,
Rattus norvegicus ENSRNOG00000021175 ortholog_one2one 1 retrogene
retro_rnor_2431,
Sarcophilus harrisii ENSSHAG00000004156 ortholog_one2many 1 retrogene
retro_shar_87,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_760 74.87 75.98
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Download FASTA sequences of all ENSECAG00000002621 retrocopies