Parental gene: | Otub1, ENSRNOG00000021175 |
| Aliases: | None |
| Description: | Ubiquitin thioesterase OTUB1 [Source:UniProtKB/Swiss-Prot;Acc:B2RYG6] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 1:229442241..229450521(-) |
>ENSRNOG00000021175
ATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCAGCGATTCCGAAGGTGTTAACTGTCTAGCCTATGA
TGAAGCCATTATGGCTCAGCAAGACCGGATTCAGCAAGAGATTGCTGTGCAGAATCCTCTGGTGTCAGAGCGACTGGAAC
TCTCAGTTCTGTATAAGGAGTATGCTGAGGATGACAACATTTACCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCC
TACATACGGAAGACCAGGCCCGACGGGAACTGCTTCTATCGAGCGTTTGGCTTCTCCCACTTGGAGGCACTGCTCGATGA
CAGCAAGGAACTGCAGCGGTTCAAAGCCGTGTCTGCCAAGAGTAAAGAGGACCTGGTGTCCCAGGGCTTCACTGAATTCA
CAATCGAGGACTTCCACAACACATTCATGGACCTTATCGAGCAGGTGGAGAAGCAGACCTCAGTAGCTGACCTGCTGGCC
TCCTTCAACGACCAGAGCACCTCAGACTACCTTGTGGTCTACCTGCGACTGCTCACCTCAGGCTACCTGCAGCGGGAGAG
CAAGTTCTTCGAGCACTTCATAGAGGGTGGCCGGACTGTTAAGGAGTTCTGCCAGCAGGAGGTGGAACCCATGTGCAAGG
AGAGCGACCACATCCACATCATCGCCCTGGCCCAGGCCCTCAGTGTGTCCATCCAGGTGGAGTACATGGACCGCGGCGAG
GGCGGCACCACCAATCCACACGTCTTCCCCGAGGGCTCTGAGCCCAAGGTCTACCTGCTCTACCGACCTGGACACTACGA
TATCCTCTACAAATGA
ATGGCGGCGGAGGAACCTCAGCAGCAGAAGCAGGAGCCGCTGGGCAGCGATTCCGAAGGTGTTAACTGTCTAGCCTATGA
TGAAGCCATTATGGCTCAGCAAGACCGGATTCAGCAAGAGATTGCTGTGCAGAATCCTCTGGTGTCAGAGCGACTGGAAC
TCTCAGTTCTGTATAAGGAGTATGCTGAGGATGACAACATTTACCAACAGAAGATCAAGGACCTCCACAAAAAGTACTCC
TACATACGGAAGACCAGGCCCGACGGGAACTGCTTCTATCGAGCGTTTGGCTTCTCCCACTTGGAGGCACTGCTCGATGA
CAGCAAGGAACTGCAGCGGTTCAAAGCCGTGTCTGCCAAGAGTAAAGAGGACCTGGTGTCCCAGGGCTTCACTGAATTCA
CAATCGAGGACTTCCACAACACATTCATGGACCTTATCGAGCAGGTGGAGAAGCAGACCTCAGTAGCTGACCTGCTGGCC
TCCTTCAACGACCAGAGCACCTCAGACTACCTTGTGGTCTACCTGCGACTGCTCACCTCAGGCTACCTGCAGCGGGAGAG
CAAGTTCTTCGAGCACTTCATAGAGGGTGGCCGGACTGTTAAGGAGTTCTGCCAGCAGGAGGTGGAACCCATGTGCAAGG
AGAGCGACCACATCCACATCATCGCCCTGGCCCAGGCCCTCAGTGTGTCCATCCAGGTGGAGTACATGGACCGCGGCGAG
GGCGGCACCACCAATCCACACGTCTTCCCCGAGGGCTCTGAGCCCAAGGTCTACCTGCTCTACCGACCTGGACACTACGA
TATCCTCTACAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 21 .38 RPM |
| SRP017611_kidney | 49 .06 RPM |
| SRP017611_brain | 134 .59 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000018084 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000003967 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000014729 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000002621 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012235 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013314 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017099 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000004156 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_2431 | 95.57 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000021175 retrocopies