RetrogeneDB ID: | retro_mluc_1257 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429809:6508135..6508915(-) | ||
Located in intron of: | ENSMLUG00000006574 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000012235 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 95.82 % |
Parental protein coverage: | 87.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | QKQEPLGSDAEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHKK |
.KQEPLGS.AEGVNCLAYDEA.MA.QDRIQQEIAVQNPLVSE.LELSVLYKEYAEDDNIYQQKIKDLHKK | |
Retrocopy | EKQEPLGSNAEGVNCLAYDEAMMA*QDRIQQEIAVQNPLVSEQLELSVLYKEYAEDDNIYQQKIKDLHKK |
Parental | YSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQ |
YSYI.KTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQ | |
Retrocopy | YSYICKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQ |
Parental | VEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHI |
VEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHI | |
Retrocopy | VEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESDHI |
Parental | HIIALAQALNVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
HIIALAQALNVSIQVEYM..G...TTNPHIFPEGSEPKVYLLYRPGHYDILYK | |
Retrocopy | HIIALAQALNVSIQVEYMGHG---TTNPHIFPEGSEPKVYLLYRPGHYDILYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000018084 | 1 retrocopy | |
Bos taurus | ENSBTAG00000003967 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000014729 | 2 retrocopies | |
Equus caballus | ENSECAG00000002621 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000012235 | 2 retrocopies |
retro_mluc_1257 , retro_mluc_614,
|
Mustela putorius furo | ENSMPUG00000013314 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000017099 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000021175 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000004156 | 1 retrocopy |