RetrogeneDB ID: | retro_mluc_614 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:1164153..1164944(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000012235 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.77 % |
Parental protein coverage: | 87.71 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | QQKQEPLGSDAEGVNCLAYDEAIMAQQDRIQQEIAVQNPLVSERLELSVLYKEYAEDDNIYQQKIKDLHK |
.QKQEPLGS..EGVN.LAY.EAIMAQQ.R.QQEIAVQN.LVSE.LELSVLYK.YAEDDNIYQQKIK.LHK | |
Retrocopy | EQKQEPLGSNTEGVN*LAYEEAIMAQQNRVQQEIAVQNFLVSEQLELSVLYKNYAEDDNIYQQKIKYLHK |
Parental | KYSYIRKTRPDGNCFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDL-VSQGFTEFTIEDFHNTFMDLI |
KY.YIRKTRPDGN.FY..F.FSHLE.LLDDSKELQRFKAVSAKSK.D...S.GFTEFTIEDFHNT.MDLI | |
Retrocopy | KYLYIRKTRPDGNYFY*TFEFSHLEVLLDDSKELQRFKAVSAKSKDDV<LS*GFTEFTIEDFHNTLMDLI |
Parental | EQVEKQTSVADLLASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGGRTVKEFCQQEVEPMCKESD |
EQVE.QTSVADLLASFNDQSTS.YLVVYL.LLTSGYLQRESKFF.HFIEG..TVKEFCQQEVEPM.KES. | |
Retrocopy | EQVEEQTSVADLLASFNDQSTSNYLVVYLQLLTSGYLQRESKFFGHFIEGR*TVKEFCQQEVEPMYKESN |
Parental | HIHIIALAQALNVSIQVEYMDRGEGGTTNPHIFPEGSEPKVYLLYRPGHYDILYK |
HIHIIALAQALNVS.QVEY.D....GTTNPHIFPE.SE..V..LY.PGHYDILYK | |
Retrocopy | HIHIIALAQALNVSVQVEYIDCDVVGTTNPHIFPESSESRVCFLYQPGHYDILYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000018084 | 1 retrocopy | |
Bos taurus | ENSBTAG00000003967 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000014729 | 2 retrocopies | |
Equus caballus | ENSECAG00000002621 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000012235 | 2 retrocopies |
retro_mluc_1257, retro_mluc_614 ,
|
Mustela putorius furo | ENSMPUG00000013314 | 1 retrocopy | |
Pteropus vampyrus | ENSPVAG00000017099 | 2 retrocopies | |
Rattus norvegicus | ENSRNOG00000021175 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000004156 | 1 retrocopy |