Parental gene:

DNAJC19, ENSFCAG00000010591

Aliases:None
Description:DnaJ (Hsp40) homolog, subfamily C, member 19 [Source:HGNC Symbol;Acc:30528]
Organism:Cat (Felis catus)
Coordinates:JH408733.1:134056..137789(-)


>ENSFCAG00000010591
CAGGCCAGTACAGTGGTAGCAGTTGGACTGACCATTGCTGCTGCAGGATTTGCAGGCCGTTATGTTTTGCAAGCCATGAA
ACATATGGAGCCTCAAGTAAAACAAGTTTTTCAAAGTCTACCAAAATCTGCTTTCAGTGGTGGCTATTATAGAGGTGGGT
TTGAACCTAAAATGACAAAACGAGAAGCAGCATTAATACTAGGCATTAGCCCTACTGCCAATAAAGGAAAAATAAGAGAT
GCCCATAGACGAATTATGCTTTTAAATCACCCAGACAAGGGAGGATCTCCTTATATAGCAGCCAAAATCAATGAAGCTAA
AGATTTACTAGAAGGTCAAGCTAAAAAAATGATAAAATATTTGGAGATTTTAACACTCAGTAATTAT

Library Parental gene expression (RPM)
SRP017611_liver 38 .52 RPM
SRP017611_kidney 20 .41 RPM
SRP017611_brain 13 .31 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012255 ortholog_one2one 6 retrogenes
retro_amel_1087, retro_amel_155, retro_amel_252, retro_amel_283, retro_amel_744, retro_amel_994,
Bos taurus ENSBTAG00000023513 possible_ortholog 1 retrogene
retro_btau_127,
Callithrix jacchus ENSCJAG00000012795 possible_ortholog 10 retrogenes
retro_cjac_1008, retro_cjac_1192, retro_cjac_1364, retro_cjac_1430, retro_cjac_1550, retro_cjac_252, retro_cjac_2609, retro_cjac_2890, retro_cjac_3060, retro_cjac_914,
Cavia porcellus ENSCPOG00000021198 possible_ortholog 1 retrogene
retro_cpor_126,
Dasypus novemcinctus ENSDNOG00000019067 ortholog_one2many 1 retrogene
retro_dnov_49,
Erinaceus europaeus ENSEEUG00000006955 possible_ortholog 9 retrogenes
retro_eeur_221, retro_eeur_230, retro_eeur_309, retro_eeur_455, retro_eeur_48, retro_eeur_511, retro_eeur_596, retro_eeur_74, retro_eeur_94,
Echinops telfairi ENSETEG00000006897 possible_ortholog 7 retrogenes
retro_etel_1071, retro_etel_1222, retro_etel_1559, retro_etel_275, retro_etel_384, retro_etel_81, retro_etel_821,
Ficedula albicollis ENSFALG00000008296 ortholog_one2one 1 retrogene
retro_falb_28,
Felis catus ENSFCAG00000022632 within_species_paralog 1 retrogene
retro_fcat_259,
Gallus gallus ENSGALG00000008852 ortholog_one2one 1 retrogene
retro_ggal_17,
Loxodonta africana ENSLAFG00000001910 possible_ortholog 5 retrogenes
retro_lafr_48, retro_lafr_515, retro_lafr_611, retro_lafr_881, retro_lafr_929,
Microcebus murinus ENSMICG00000010381 possible_ortholog 4 retrogenes
retro_mmur_1160, retro_mmur_225, retro_mmur_320, retro_mmur_728,
Myotis lucifugus ENSMLUG00000006865 ortholog_one2many 1 retrogene
retro_mluc_84,
Mustela putorius furo ENSMPUG00000002336 ortholog_one2one 7 retrogenes
retro_mputfur_1099, retro_mputfur_1652, retro_mputfur_287, retro_mputfur_662, retro_mputfur_841, retro_mputfur_848, retro_mputfur_984,
Otolemur garnettii ENSOGAG00000008754 possible_ortholog 11 retrogenes
retro_ogar_1214, retro_ogar_1334, retro_ogar_138, retro_ogar_1625, retro_ogar_1811, retro_ogar_2012, retro_ogar_2048, retro_ogar_2881, retro_ogar_301, retro_ogar_442, retro_ogar_718,
Tupaia belangeri ENSTBEG00000015089 possible_ortholog 27 retrogenes
retro_tbel_1126, retro_tbel_1166, retro_tbel_1167, retro_tbel_1296, retro_tbel_1301, retro_tbel_1491, retro_tbel_1693, retro_tbel_1780, retro_tbel_2117, retro_tbel_2136, retro_tbel_2267, retro_tbel_2459, retro_tbel_266, retro_tbel_2830, retro_tbel_3233, retro_tbel_3303, retro_tbel_3556, retro_tbel_3716, retro_tbel_3814, retro_tbel_384, retro_tbel_3849, retro_tbel_3963, retro_tbel_4043, retro_tbel_42, retro_tbel_633, retro_tbel_833, retro_tbel_889,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_475 60.27 55.04
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2. retro_fcat_511 68.97 89.15
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3. retro_fcat_982 77.22 61.24
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4. retro_fcat_1250 65.06 63.57
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5. retro_fcat_1481 80.17 89.92
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6. retro_fcat_1603 83.62 89.15
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7. retro_fcat_1837 73.24 54.26
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Download FASTA sequences of all ENSFCAG00000010591 retrocopies