Parental gene: | ENSFCAG00000014178 |
| Aliases: | None |
| Description: | None |
| Organism: | Cat (Felis catus) |
| Coordinates: | B2:17816663..17822203(-) |
>ENSFCAG00000014178
ATGCAGAAGGACTCTGGCCCGCTAGTGCCTTTACACTGGATTGGCTTTGGCTATGCAGCACTGGTTGCTTCTGGTGGGAT
CATTGGCTATGCAAAAGCAGGTAGCGTCCCGTCACTGGCTGCTGGCCTTCTTTTCGGAAGTTTAGCAGGCCTGGGTGCCT
ATCAGCTGTCTCAGGATCCGAGGAACATTTGGGTTTTCCTAGCTACATCCGGAACCTTAGCTGGCATTATGGGGATGCGA
TTCTACCACTCTGGGAAATTTCTGCCTGCGGGCTTAATCGCGGGTGCCAGTTTGCTGATGGTCGCCAAACTTGGAATTAG
TGTGTTGAATAGACCCCATCAGTAG
ATGCAGAAGGACTCTGGCCCGCTAGTGCCTTTACACTGGATTGGCTTTGGCTATGCAGCACTGGTTGCTTCTGGTGGGAT
CATTGGCTATGCAAAAGCAGGTAGCGTCCCGTCACTGGCTGCTGGCCTTCTTTTCGGAAGTTTAGCAGGCCTGGGTGCCT
ATCAGCTGTCTCAGGATCCGAGGAACATTTGGGTTTTCCTAGCTACATCCGGAACCTTAGCTGGCATTATGGGGATGCGA
TTCTACCACTCTGGGAAATTTCTGCCTGCGGGCTTAATCGCGGGTGCCAGTTTGCTGATGGTCGCCAAACTTGGAATTAG
TGTGTTGAATAGACCCCATCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 28 .41 RPM |
| SRP017611_kidney | 77 .60 RPM |
| SRP017611_brain | 23 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002614 | ortholog_one2many | 3 retrogenes | |
| Bos taurus | ENSBTAG00000005808 | ortholog_one2many | 1 retrogene | |
| Canis familiaris | ENSCAFG00000009692 | ortholog_many2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000004957 | ortholog_many2many | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007732 | ortholog_many2many | 6 retrogenes | |
| Equus caballus | ENSECAG00000026994 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000009000 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000111843 | ortholog_many2many | 2 retrogenes | |
| Homo sapiens | ENSG00000137210 | ortholog_many2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000009702 | ortholog_many2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000009795 | ortholog_one2many | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000000210 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018788 | ortholog_many2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000613 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000021361 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000564 | ortholog_one2many | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000016368 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000012165 | ortholog_one2many | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000014366 | ortholog_one2many | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000016225 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017720 | ortholog_many2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000015437 | ortholog_many2many | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000011456 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001038 | ortholog_one2many | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000022833 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003666 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_93 | 82.69 | 91.23 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_fcat_301 | 61.54 | 65.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_fcat_314 | 88.89 | 69.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_fcat_367 | 80.19 | 92.98 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_fcat_983 | 72.17 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000014178 retrocopies