Parental gene: | GRPEL2, ENSG00000164284 |
| Aliases: | GRPEL2, Mt-GrpE#2 |
| Description: | GrpE-like 2, mitochondrial (E. coli) [Source:HGNC Symbol;Acc:21060] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 5:148724992..148734146(+) |
>ENSG00000164284
ATGGCCGTACGGTCGCTGTGGGCGGGCCGGCTGCGGGTGCAGCGCCTACTGGCCTGGAGTGCCGCGTGGGAGAGCAAGGG
ATGGCCGCTTCCATTCAGCACTGCCACCCAGAGAACTGCTGGTGAGGACTGCCGTTCTGAGGACCCTCCTGATGAGCTTG
GGCCCCCTCTTGCTGAACGAGCCTTAAGGGTAAAAGCTGTTAAACTGGAGAAAGAAGTCCAAGATTTAACAGTGAGATAC
CAGAGAGCTATAGCTGATTGTGAAAACATAAGGAGGCGAACCCAGAGATGTGTGGAAGACGCCAAGATATTTGGAATCCA
GAGTTTCTGTAAGGACTTGGTGGAGGTGGCTGACATTTTGGAGAAGACTACAGAGTGCATTTCTGAAGAATCGGAGCCTG
AGGACCAAAAGCTCACTCTGGAGAAGGTCTTCCGAGGGTTGTTGCTTTTAGAAGCAAAGCTGAAAAGTGTGTTTGCCAAG
CATGGCCTGGAGAAACTGACACCCATTGGTGACAAATATGACCCCCATGAGCATGAACTCATCTGTCATGTGCCAGCTGG
TGTTGGGGTGCAGCCTGGCACCGTGGCATTAGTAAGACAAGATGGCTACAAACTTCATGGCCGCACCATTAGGCTTGCCC
GAGTGGAAGTGGCAGTGGAGTCTCAGAGAAGACTGTGA
ATGGCCGTACGGTCGCTGTGGGCGGGCCGGCTGCGGGTGCAGCGCCTACTGGCCTGGAGTGCCGCGTGGGAGAGCAAGGG
ATGGCCGCTTCCATTCAGCACTGCCACCCAGAGAACTGCTGGTGAGGACTGCCGTTCTGAGGACCCTCCTGATGAGCTTG
GGCCCCCTCTTGCTGAACGAGCCTTAAGGGTAAAAGCTGTTAAACTGGAGAAAGAAGTCCAAGATTTAACAGTGAGATAC
CAGAGAGCTATAGCTGATTGTGAAAACATAAGGAGGCGAACCCAGAGATGTGTGGAAGACGCCAAGATATTTGGAATCCA
GAGTTTCTGTAAGGACTTGGTGGAGGTGGCTGACATTTTGGAGAAGACTACAGAGTGCATTTCTGAAGAATCGGAGCCTG
AGGACCAAAAGCTCACTCTGGAGAAGGTCTTCCGAGGGTTGTTGCTTTTAGAAGCAAAGCTGAAAAGTGTGTTTGCCAAG
CATGGCCTGGAGAAACTGACACCCATTGGTGACAAATATGACCCCCATGAGCATGAACTCATCTGTCATGTGCCAGCTGG
TGTTGGGGTGCAGCCTGGCACCGTGGCATTAGTAAGACAAGATGGCTACAAACTTCATGGCCGCACCATTAGGCTTGCCC
GAGTGGAAGTGGCAGTGGAGTCTCAGAGAAGACTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 10 .20 RPM |
| bodymap2_lung | 25 .21 RPM |
| bodymap2_breast | 27 .61 RPM |
| bodymap2_adipose | 26 .93 RPM |
| bodymap2_adrenal | 28 .90 RPM |
| bodymap2_skeletal_muscle | 11 .55 RPM |
| bodymap2_thyroid | 22 .73 RPM |
| bodymap2_prostate | 17 .87 RPM |
| bodymap2_colon | 15 .02 RPM |
| bodymap2_testis | 28 .56 RPM |
| bodymap2_brain | 28 .93 RPM |
| bodymap2_heart | 13 .62 RPM |
| bodymap2_white_blood_cells | 26 .11 RPM |
| bodymap2_lymph_node | 21 .71 RPM |
| bodymap2_ovary | 34 .00 RPM |
| bodymap2_kidney | 17 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004070 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011142 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003624 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000109519 | within_species_paralog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005410 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021662 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010160 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000016138 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000014326 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015933 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017396 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000005467 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1284 | 76.67 | 66.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4842 | 84.07 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000164284 retrocopies