Parental gene: | ENSOCUG00000016138 |
| Aliases: | None |
| Description: | GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:G1TAZ2] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:31192468..31197128(+) |
>ENSOCUG00000016138
TCCTCCTGGATTGCGAACATGGCCGCGCGGTCGCTGTGGGCGGTCCGGCGGCGGGTGCAGCGCCTCCTGACCTCGAGTGC
CGCGTGGGAGAACAGAGGATGGCTGCCCCCATTCAGCACTGCCACCCAGAGAACTGCTGGTGAGGACTGCAGTTCCGAGG
ACCCTCCAGATGAGCTTGGGCCATCTCTTACTGAACGAGCCCTAAGGCTAAAAGCTGTGAAACTGGAAAAGGAAGTCCAG
GATTTAACAATAAGATACCAGAGAGCTGTGGCTGACTGTGAAAACATAAGGAGGCGGACCCAGAGATGTGTAGAAGATGC
CAAGATATTTGGAATCCAGAGTTTCTGTAAGGACTTGGTGGAGGTGGCGGACATTTTGGAGAAGACTACTGAGTGCATTT
CTGAAGAAACAGAGTCTGGGGACCAGACACTCATTCTGGAGAAGGTCTTTCGGGGGCTGTCACTCCTAGAAGCAAAGCTG
AAAAGTGTGTTTGCCAAGCATGGCCTGGAGAAGATGGCACCCATTGGTGATAAATACGACCCTCATGAGCATGAACTCAT
CTGTCACGTGCCAGCTGGTGTTGGGGTGCAGCCTGGCACGGTGGCATTAGTAAGACAAGATGGCTACAAACTTCATGGTC
GCACCATTAGACTTGCCCAGGTAGAAGTGGCAGTGGAGTCTCAGAGAAGACTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 5 .24 RPM |
| SRP017611_kidney | 3 .55 RPM |
| SRP017611_liver | 0 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004070 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011142 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000003624 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000164284 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000005410 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000021662 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010160 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014326 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015933 | ortholog_one2many | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000017396 | ortholog_one2many | 2 retrogenes | |
| Sorex araneus | ENSSARG00000005467 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_89 | 95.56 | 97.40 | Please wait, loading  |
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| 2. | retro_ocun_905 | 70.98 | 83.55 | Please wait, loading |
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| 3. | retro_ocun_943 | 98.71 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSOCUG00000016138 retrocopies