Parental gene:

RPL10A, ENSG00000198755

Aliases:RPL10A, CSA19, Csa-19, L10A, NEDD6
Description:ribosomal protein L10a [Source:HGNC Symbol;Acc:10299]
Organism:Human (Homo sapiens)
Coordinates:6:35436184..35438562(+)


>ENSG00000198755
ATGAGCAGCAAAGTCTCTCGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGCCGCAA
GTTCCTGGAGACGGTGGAGTTGCAGATCAGCTTGAAGAACTATGATCCCCAGAAGGACAAGCGCTTCTCGGGCACCGTCA
GGCTTAAGTCCACTCCCCGCCCTAAGTTCTCTGTGTGTGTCCTGGGGGACCAGCAGCACTGTGACGAGGCTAAGGCCGTG
GATATCCCCCACATGGACATCGAGGCGCTGAAAAAACTCAACAAGAATAAAAAACTGGTCAAGAAGCTGGCCAAGAAGTA
TGATGCGTTTTTGGCCTCAGAGTCTCTGATCAAGCAGATTCCACGAATCCTCGGCCCAGGTTTAAATAAGGCAGGAAAGT
TCCCTTCCCTGCTCACACACAACGAAAACATGGTGGCCAAAGTGGATGAGGTGAAGTCCACAATCAAGTTCCAAATGAAG
AAGGTGTTATGTCTGGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGAGCTTGTGTATAACATTCACCTGGCTGT
CAACTTCTTGGTGTCATTGCTCAAGAAAAACTGGCAGAATGTCCGGGCCTTATATATCAAGAGCACCATGGGCAAGCCCC
AGCGCCTATATTAA

Library Parental gene expression (RPM)
bodymap2_adipose 373 .55 RPM
bodymap2_adrenal 462 .34 RPM
bodymap2_brain 118 .86 RPM
bodymap2_breast 239 .75 RPM
bodymap2_colon 606 .18 RPM
bodymap2_heart 119 .96 RPM
bodymap2_kidney 264 .71 RPM
bodymap2_liver 193 .24 RPM
bodymap2_lung 499 .54 RPM
bodymap2_lymph_node 511 .32 RPM
bodymap2_ovary 813 .85 RPM
bodymap2_prostate 994 .59 RPM
bodymap2_skeletal_muscle 389 .84 RPM
bodymap2_testis 250 .35 RPM
bodymap2_thyroid 301 .21 RPM
bodymap2_white_blood_cells 605 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000670 ortholog_one2one 13 retrogenes
retro_amel_1144, retro_amel_1223, retro_amel_1262, retro_amel_1591, retro_amel_1813, retro_amel_198, retro_amel_318, retro_amel_320, retro_amel_417, retro_amel_520, retro_amel_609, retro_amel_710, retro_amel_970,
Echinops telfairi ENSETEG00000013325 possible_ortholog 2 retrogenes
retro_etel_1974, retro_etel_326,
Felis catus ENSFCAG00000012904 ortholog_one2one 7 retrogenes
retro_fcat_1144, retro_fcat_1488, retro_fcat_1561, retro_fcat_1971, retro_fcat_210, retro_fcat_262, retro_fcat_560,
Gorilla gorilla ENSGGOG00000028140 possible_ortholog 10 retrogenes
retro_ggor_1, retro_ggor_1124, retro_ggor_1282, retro_ggor_1407, retro_ggor_2088, retro_ggor_2273, retro_ggor_234, retro_ggor_2702, retro_ggor_358, retro_ggor_57,
Macropus eugenii ENSMEUG00000005760 ortholog_one2one 6 retrogenes
retro_meug_1337, retro_meug_1578, retro_meug_2066, retro_meug_407, retro_meug_541, retro_meug_705,
Macaca mulatta ENSMMUG00000015907 ortholog_one2one 6 retrogenes
retro_mmul_1931, retro_mmul_2041, retro_mmul_2321, retro_mmul_2330, retro_mmul_306, retro_mmul_583,
Monodelphis domestica ENSMODG00000013766 ortholog_one2one 2 retrogenes
retro_mdom_276, retro_mdom_499,
Nomascus leucogenys ENSNLEG00000008650 ortholog_one2one 13 retrogenes
retro_nleu_1174, retro_nleu_1210, retro_nleu_1697, retro_nleu_1778, retro_nleu_1980, retro_nleu_2055, retro_nleu_2342, retro_nleu_2436, retro_nleu_2879, retro_nleu_662, retro_nleu_838, retro_nleu_986, retro_nleu_989,
Ornithorhynchus anatinus ENSOANG00000014574 ortholog_one2one 1 retrogene
retro_oana_86,
Oryctolagus cuniculus ENSOCUG00000004065 possible_ortholog 2 retrogenes
retro_ocun_130, retro_ocun_4,
Rattus norvegicus ENSRNOG00000000505 ortholog_one2many 4 retrogenes
retro_rnor_2302, retro_rnor_37, retro_rnor_400, retro_rnor_43,
Sarcophilus harrisii ENSSHAG00000002047 ortholog_one2one 1 retrogene
retro_shar_438,
Tursiops truncatus ENSTTRG00000009431 ortholog_one2one 6 retrogenes
retro_ttru_100, retro_ttru_1137, retro_ttru_1325, retro_ttru_1477, retro_ttru_205, retro_ttru_494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_142 79.02 64.52
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2. retro_hsap_177 86.53 88.94
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3. retro_hsap_337 81.46 69.12
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4. retro_hsap_1462 83.23 70.51
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5. retro_hsap_1710 80.72 100.00
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6. retro_hsap_1935 64.67 82.95
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7. retro_hsap_2795 92.02 98.16
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8. retro_hsap_3025 75.34 100.00
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9. retro_hsap_3245 73.58 96.77
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10. retro_hsap_3353 88.53 100.00
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11. retro_hsap_3949 92.63 100.00
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12. retro_hsap_4025 79.36 100.00
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13. retro_hsap_4040 87.96 99.54
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Download FASTA sequences of all ENSG00000198755 retrocopies