RetrogeneDB ID: | retro_etel_326 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_5384:78734..79315(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000013325 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.05 % |
Parental protein coverage: | 98.43 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 4 |
Parental | KVSRDTLY-AVREVLLGDLRKRRKFLETVELQISLKNYDPQKDKRFSG-TVRLKST----PRPKFSVCVL |
.VS.DTL..AV.EVL.G...K.RK..ETVELQIS.KNYDPQKDKRFS..TV.LK......P.PKFS..VL | |
Retrocopy | RVS*DTLQEAVWEVLPGNQHKHRKVWETVELQISWKNYDPQKDKRFSA<TVSLKPNPHPYPSPKFSERVL |
Parental | GDQQHCDE-AKAVDIPHMDIEALKKLNKNKKLVKKLAKKYDAFL-ASESLIKQIPRILGPG-LNKAGKFP |
G.QQHC...A.A.DIPH.DI.ALK.LNKN.KLVKKL..K..AFL.ASESLIK..PRILG.G..N.A.K.P | |
Retrocopy | GGQQHCNV>AQAIDIPHLDIKALKNLNKNQKLVKKLTTK*EAFL>ASESLIK*MPRILGSG>RNEADKSP |
Parental | SLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVS |
SLLTHNENMV.KVDE.K..IKF..KKVLCL.V...HVKMTDDELVYNIHLAV.FLVS | |
Retrocopy | SLLTHNENMVVKVDEMKPNIKFLVKKVLCLTVVMDHVKMTDDELVYNIHLAVKFLVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |