Parental gene:

RPL10A, ENSMMUG00000015907

Aliases:None
Description:60S ribosomal protein L10a [Source:RefSeq peptide;Acc:NP_001253155]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:35190248..35192907(+)


>ENSMMUG00000015907
ATGAGCAGCAAAGTCTCTCGCGACACCCTGTACGAGGCGGTGCGGGAAGTCCTGCACGGGAACCAGCGCAAGCGCCGCAA
GTTCCTGGAGACGGTGGAGTTGCAGATCAGCTTGAAGAACTATGACCCCCAGAAGGACAAGCGCTTCTCAGGCACCGTCA
GGCTTAAGTCCACTCCCCGCCCCAAGTTCTCTGTGTGTGTCCTGGGGGACCAGCAGCACTGTGACGAGGCCAAGGCCGTG
GATATCCCCCACATGGACATCGAGGCGCTGAAAAAACTCAACAAGAATAAAAAACTGGTCAAGAAACTAGCCAAGAAGTA
TGATGCGTTTTTGGCCTCAGAGTCTCTGATCAAGCAGATTCCACGAATCCTCGGCCCAGGCCTAAATAAGGCAGGAAAGT
TCCCTTCCCTGCTCACACACAACGAAAACATGGTGGCCAAAGTGGATGAGGTGAAGTCCACAATCAAGTTCCAAATGAAG
AAGGTGTTATGTCTGGCTGTAGCTGTTGGTCACGTGAAGATGACAGACGATGAGCTTGTGTATAACATTCACCTGGCTGT
CAACTTCTTGGTGTCATTGCTCAAGAAAAACTGGCAGAATGTCCGGGCCTTATATATCAAGAGCACCATGGGCAAGCCCC
AGCGCCTATATTAA

Library Parental gene expression (RPM)
SRP007412_brain 102 .41 RPM
SRP007412_brain_prefrontal_cortex 157 .15 RPM
SRP007412_cerebellum 96 .41 RPM
SRP007412_heart 174 .01 RPM
SRP007412_kidney 159 .15 RPM
SRP007412_liver 165 .86 RPM
SRP007412_testis 49 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000670 ortholog_one2one 13 retrogenes
retro_amel_1144, retro_amel_1223, retro_amel_1262, retro_amel_1591, retro_amel_1813, retro_amel_198, retro_amel_318, retro_amel_320, retro_amel_417, retro_amel_520, retro_amel_609, retro_amel_710, retro_amel_970,
Echinops telfairi ENSETEG00000013325 possible_ortholog 2 retrogenes
retro_etel_1974, retro_etel_326,
Felis catus ENSFCAG00000012904 ortholog_one2one 7 retrogenes
retro_fcat_1144, retro_fcat_1488, retro_fcat_1561, retro_fcat_1971, retro_fcat_210, retro_fcat_262, retro_fcat_560,
Homo sapiens ENSG00000198755 ortholog_one2one 13 retrogenes
retro_hsap_142, retro_hsap_1462, retro_hsap_1710, retro_hsap_177, retro_hsap_1935, retro_hsap_2795, retro_hsap_3025, retro_hsap_3245, retro_hsap_3353, retro_hsap_337, retro_hsap_3949, retro_hsap_4025, retro_hsap_4040,
Gorilla gorilla ENSGGOG00000028140 possible_ortholog 10 retrogenes
retro_ggor_1, retro_ggor_1124, retro_ggor_1282, retro_ggor_1407, retro_ggor_2088, retro_ggor_2273, retro_ggor_234, retro_ggor_2702, retro_ggor_358, retro_ggor_57,
Macropus eugenii ENSMEUG00000005760 ortholog_one2many 6 retrogenes
retro_meug_1337, retro_meug_1578, retro_meug_2066, retro_meug_407, retro_meug_541, retro_meug_705,
Monodelphis domestica ENSMODG00000013766 ortholog_one2many 2 retrogenes
retro_mdom_276, retro_mdom_499,
Nomascus leucogenys ENSNLEG00000008650 ortholog_one2one 13 retrogenes
retro_nleu_1174, retro_nleu_1210, retro_nleu_1697, retro_nleu_1778, retro_nleu_1980, retro_nleu_2055, retro_nleu_2342, retro_nleu_2436, retro_nleu_2879, retro_nleu_662, retro_nleu_838, retro_nleu_986, retro_nleu_989,
Ornithorhynchus anatinus ENSOANG00000014574 ortholog_one2many 1 retrogene
retro_oana_86,
Oryctolagus cuniculus ENSOCUG00000004065 possible_ortholog 2 retrogenes
retro_ocun_130, retro_ocun_4,
Rattus norvegicus ENSRNOG00000000505 ortholog_one2many 4 retrogenes
retro_rnor_2302, retro_rnor_37, retro_rnor_400, retro_rnor_43,
Sarcophilus harrisii ENSSHAG00000002047 ortholog_one2many 1 retrogene
retro_shar_438,
Tursiops truncatus ENSTTRG00000009431 ortholog_one2one 6 retrogenes
retro_ttru_100, retro_ttru_1137, retro_ttru_1325, retro_ttru_1477, retro_ttru_205, retro_ttru_494,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_306 94.47 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_583 75.59 97.69
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_1931 81.67 53.92
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmul_2041 70.28 96.77
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmul_2321 76.61 99.08
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmul_2330 86.92 97.70
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000015907 retrocopies