Parental gene:

RPS11, ENSMICG00000002542

Aliases:None
Description:ribosomal protein S11 [Source:HGNC Symbol;Acc:10384]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:scaffold_21344:2089..5404(+)


>ENSMICG00000002542
ATGGCGGACATTCAGACAGAACGTGCCTACCAAAAGCAGCCGACCATCTTCCAAAACAAGAAGAGGGTCCTGCTGGGAGA
AACTGGCAAGGAGAAGCTCCCTCGGTACTACAAGAACATCGGTCTGGGCTTCAAGACTCCCAAAGAGGCCATTGAGGGCA
CCTACATTGACAAGAAATGCCCCTTCACTGGTAACGTCTCCATCCGAGGGCGAATCCTGTCTGGTGTGGTGACCAAGATG
AAGATGCAGAGAACCATTGTCATCCGCCGAGACTATCTCCACTACATCCGCAAGTACAATCGCTTTGAGAAGCGCCACAA
GAACATGTCTGTGCACCTGTCCCCCTGCTTCAGGGACGTCCAGATTGGCGACATTGTCACAGTGGGCGAGTGCCGGCCCC
TGAGCAAGACGGTGCGCTTCAACGTGCTCAAGGTCACCAAGGCTGCCGGCACCAAGAAGCAGTTCCAGAAGTTCTGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000003631 possible_ortholog 9 retrogenes
retro_cfam_126, retro_cfam_1333, retro_cfam_1572, retro_cfam_1656, retro_cfam_1669, retro_cfam_1900, retro_cfam_1955, retro_cfam_2121, retro_cfam_248,
Danio rerio ENSDARG00000053058 ortholog_one2many 1 retrogene
retro_drer_15,
Dipodomys ordii ENSDORG00000012195 ortholog_one2one 1 retrogene
retro_dord_635,
Equus caballus ENSECAG00000000370 ortholog_one2one 1 retrogene
retro_ecab_868,
Felis catus ENSFCAG00000009196 ortholog_one2one 13 retrogenes
retro_fcat_1362, retro_fcat_1491, retro_fcat_1535, retro_fcat_1564, retro_fcat_1719, retro_fcat_1945, retro_fcat_197, retro_fcat_1991, retro_fcat_273, retro_fcat_507, retro_fcat_792, retro_fcat_854, retro_fcat_995,
Monodelphis domestica ENSMODG00000013434 ortholog_one2one 7 retrogenes
retro_mdom_1185, retro_mdom_1284, retro_mdom_1421, retro_mdom_1950, retro_mdom_636, retro_mdom_922, retro_mdom_978,
Mus musculus ENSMUSG00000003429 ortholog_one2one 16 retrogenes
retro_mmus_1738, retro_mmus_2230, retro_mmus_2255, retro_mmus_2322, retro_mmus_2486, retro_mmus_2854, retro_mmus_3048, retro_mmus_3051, retro_mmus_3060, retro_mmus_3342, retro_mmus_398, retro_mmus_404, retro_mmus_714, retro_mmus_754, retro_mmus_842, retro_mmus_860,
Otolemur garnettii ENSOGAG00000004627 possible_ortholog 7 retrogenes
retro_ogar_1290, retro_ogar_1813, retro_ogar_1910, retro_ogar_2037, retro_ogar_2573, retro_ogar_2640, retro_ogar_840,
Pan troglodytes ENSPTRG00000011299 possible_ortholog 1 retrogene
retro_ptro_88,
Rattus norvegicus ENSRNOG00000020595 possible_ortholog 18 retrogenes
retro_rnor_1132, retro_rnor_1159, retro_rnor_1261, retro_rnor_1299, retro_rnor_1363, retro_rnor_1414, retro_rnor_1435, retro_rnor_1451, retro_rnor_1635, retro_rnor_1790, retro_rnor_2000, retro_rnor_2647, retro_rnor_385, retro_rnor_394, retro_rnor_538, retro_rnor_737, retro_rnor_835, retro_rnor_989,
Ictidomys tridecemlineatus ENSSTOG00000023443 possible_ortholog 2 retrogenes
retro_itri_1033, retro_itri_805,
Tupaia belangeri ENSTBEG00000016677 possible_ortholog 16 retrogenes
retro_tbel_125, retro_tbel_1361, retro_tbel_1753, retro_tbel_2071, retro_tbel_2207, retro_tbel_2808, retro_tbel_2947, retro_tbel_319, retro_tbel_3401, retro_tbel_3571, retro_tbel_3600, retro_tbel_3742, retro_tbel_449, retro_tbel_604, retro_tbel_801, retro_tbel_836,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_186 56.88 98.73
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2. retro_mmur_295 63.89 89.87
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3. retro_mmur_430 87.97 100.00
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4. retro_mmur_452 64.78 96.84
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5. retro_mmur_812 67.96 63.92
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6. retro_mmur_820 70.44 100.00
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7. retro_mmur_1278 78.98 98.73
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8. retro_mmur_1317 65.35 62.03
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Download FASTA sequences of all ENSMICG00000002542 retrocopies