Parental gene: | Ywhaq, ENSMUSG00000076432 |
| Aliases: | Ywhaq, 2700028P07Rik, AA409740, AU021156, R74690 |
| Description: | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide [Source:MGI Symbol;Acc:MGI:891963] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 12:21390070..21417637(-) |
>ENSMUSG00000076432
ATGGAGAAGACCGAGCTGATCCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCCACCTGCATGAA
AGCCGTGACGGAGCAGGGCGCCGAGCTGTCCAACGAGGAGCGCAACCTGCTGTCGGTGGCCTACAAAAACGTGGTAGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCGAGCATTGAGCAGAAGACCGACACCTCTGACAAGAAGTTGCAGCTGATCAAG
GACTATCGGGAGAAAGTGGAGTCGGAGCTGAGGTCCATCTGCACCACGGTCCTGGAATTGTTGGATAAGTATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGAGATTATTTCCGGTATCTTGCTGAAGTAGCTT
GTGGCGATGATCGAAAACAAACAATAGAAAATTCCCAAGGAGCCTACCAAGAGGCGTTTGATATAAGCAAGAAGGAGATG
CAGCCTACGCATCCAATCCGCCTGGGGCTGGCTCTTAACTTTTCTGTATTTTACTATGAGATCCTTAATAATCCAGAGCT
TGCCTGCACACTGGCTAAAACGGCTTTTGATGAGGCCATCGCAGAGCTTGATACACTGAACGAAGACTCCTACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACTTAACATTATGGACATCAGACAGTGCAGGAGAAGAATGTGATGCAGCA
GAGGGGGCCGAAAACTAA
ATGGAGAAGACCGAGCTGATCCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCCACCTGCATGAA
AGCCGTGACGGAGCAGGGCGCCGAGCTGTCCAACGAGGAGCGCAACCTGCTGTCGGTGGCCTACAAAAACGTGGTAGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCGAGCATTGAGCAGAAGACCGACACCTCTGACAAGAAGTTGCAGCTGATCAAG
GACTATCGGGAGAAAGTGGAGTCGGAGCTGAGGTCCATCTGCACCACGGTCCTGGAATTGTTGGATAAGTATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGAGATTATTTCCGGTATCTTGCTGAAGTAGCTT
GTGGCGATGATCGAAAACAAACAATAGAAAATTCCCAAGGAGCCTACCAAGAGGCGTTTGATATAAGCAAGAAGGAGATG
CAGCCTACGCATCCAATCCGCCTGGGGCTGGCTCTTAACTTTTCTGTATTTTACTATGAGATCCTTAATAATCCAGAGCT
TGCCTGCACACTGGCTAAAACGGCTTTTGATGAGGCCATCGCAGAGCTTGATACACTGAACGAAGACTCCTACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACTTAACATTATGGACATCAGACAGTGCAGGAGAAGAATGTGATGCAGCA
GAGGGGGCCGAAAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 71 .61 RPM |
| SRP007412_cerebellum | 42 .60 RPM |
| SRP007412_heart | 9 .62 RPM |
| SRP007412_kidney | 23 .25 RPM |
| SRP007412_liver | 10 .16 RPM |
| SRP007412_testis | 33 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000004925 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015359 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000007854 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005383 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014740 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000022285 | within_species_paralog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000013534 | possible_ortholog | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010482 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000547 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000008104 | ortholog_one2one | 5 retrogenes | |
| Sorex araneus | ENSSARG00000012476 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000000871 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_406 | 56.07 | 68.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1076 | 95.54 | 88.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1378 | 97.38 | 75.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1926 | 76.47 | 76.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_2250 | 86.43 | 80.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_2299 | 86.21 | 82.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_2471 | 96.27 | 88.45 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_2689 | 91.59 | 69.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmus_3250 | 63.16 | 59.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmus_3308 | 85.88 | 86.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000076432 retrocopies