Parental gene:

YWHAQ, ENSNLEG00000013534

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397349.1:1842128..1894435(-)


>ENSNLEG00000013534
ATGGAGAAGACTGAGCTGATCCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGATGACATGGCCACCTGCATGAA
GGCAGTGACCGAGCAGGGCGCCGAGCTGTCCAACGAGGAGCGCAACCTGCTCTCCGTGGCCTACAAGAACGTGGTCGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCTAGCATCGAGCAGAAGACCGACACCTCCGACAAGAAGCTGCAGCTGATTAAG
GACTATCGGGAGAAAGTGGAGTCCGAGCTGAGATCCATCTGCACCACGGTCCTGGAATTGTTGGATAAATATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGTGACTACTTCCGGTACCTTGCTGAGGTTGCAT
GTGGTGATGATCGAAAACAAACGATAGATAATTCCCAAGGAGCTTACCAAGAGGCATTTGATATAAGCAAGAAAGAGATG
CAACCCACACACCCAATCCGCCTGGGGCTTGCTCTTAACTTTTCTGTATTTTACTATGAGATTCTTAATAACCCAGAGCT
TGCCTGCACGCTGGCTAAAACGGCTTTTGATGAGGCCATTGCTGAACTTGATACACTGAATGAAGACTCATACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACCTAACACTTTGGACATCAGACAGTGCAGGAGAAGAATGTGATGCGGCA
GAAGGGGCTGAAAACTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008618 possible_ortholog 4 retrogenes
retro_amel_1214, retro_amel_1382, retro_amel_1837, retro_amel_917,
Bos taurus ENSBTAG00000002108 ortholog_one2many 2 retrogenes
retro_btau_1180, retro_btau_86,
Choloepus hoffmanni ENSCHOG00000004661 possible_ortholog 13 retrogenes
retro_chof_136, retro_chof_1427, retro_chof_1605, retro_chof_1835, retro_chof_2026, retro_chof_2115, retro_chof_2134, retro_chof_2233, retro_chof_429, retro_chof_481, retro_chof_489, retro_chof_527, retro_chof_863,
Callithrix jacchus ENSCJAG00000006394 ortholog_one2many 2 retrogenes
retro_cjac_2197, retro_cjac_3127,
Cavia porcellus ENSCPOG00000011321 possible_ortholog 4 retrogenes
retro_cpor_135, retro_cpor_1463, retro_cpor_616, retro_cpor_668,
Equus caballus ENSECAG00000004925 possible_ortholog 1 retrogene
retro_ecab_134,
Echinops telfairi ENSETEG00000015359 ortholog_one2many 4 retrogenes
retro_etel_1027, retro_etel_1048, retro_etel_235, retro_etel_65,
Felis catus ENSFCAG00000007854 possible_ortholog 2 retrogenes
retro_fcat_1702, retro_fcat_771,
Macropus eugenii ENSMEUG00000014442 possible_ortholog 7 retrogenes
retro_meug_1122, retro_meug_1208, retro_meug_1259, retro_meug_1549, retro_meug_1918, retro_meug_2106, retro_meug_538,
Myotis lucifugus ENSMLUG00000005383 ortholog_one2many 1 retrogene
retro_mluc_1817,
Monodelphis domestica ENSMODG00000014740 ortholog_one2many 1 retrogene
retro_mdom_1339,
Mustela putorius furo ENSMPUG00000013252 ortholog_one2many 2 retrogenes
retro_mputfur_1132, retro_mputfur_730,
Mus musculus ENSMUSG00000076432 possible_ortholog 10 retrogenes
retro_mmus_1076, retro_mmus_1378, retro_mmus_1926, retro_mmus_2250, retro_mmus_2299, retro_mmus_2471, retro_mmus_2689, retro_mmus_3250, retro_mmus_3308, retro_mmus_406,
Nomascus leucogenys ENSNLEG00000000656 other_paralog 2 retrogenes
retro_nleu_2067, retro_nleu_2868,
Nomascus leucogenys ENSNLEG00000003220 within_species_paralog 7 retrogenes
retro_nleu_1368, retro_nleu_1426, retro_nleu_2186, retro_nleu_23, retro_nleu_449, retro_nleu_487, retro_nleu_722,
Nomascus leucogenys ENSNLEG00000006643 within_species_paralog 2 retrogenes
retro_nleu_42, retro_nleu_422,
Oryctolagus cuniculus ENSOCUG00000010482 ortholog_one2many 1 retrogene
retro_ocun_1463,
Otolemur garnettii ENSOGAG00000000547 possible_ortholog 3 retrogenes
retro_ogar_1047, retro_ogar_1732, retro_ogar_39,
Pelodiscus sinensis ENSPSIG00000012692 possible_ortholog 1 retrogene
retro_psin_2,
Pteropus vampyrus ENSPVAG00000005334 ortholog_one2many 1 retrogene
retro_pvam_983,
Rattus norvegicus ENSRNOG00000008104 possible_ortholog 5 retrogenes
retro_rnor_1569, retro_rnor_2065, retro_rnor_2123, retro_rnor_2180, retro_rnor_2746,
Sorex araneus ENSSARG00000012476 ortholog_one2many 4 retrogenes
retro_sara_1, retro_sara_162, retro_sara_179, retro_sara_23,
Tursiops truncatus ENSTTRG00000000871 possible_ortholog 4 retrogenes
retro_ttru_1006, retro_ttru_1109, retro_ttru_1530, retro_ttru_1536,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_750 82.83 94.29
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2. retro_nleu_869 87.45 100.00
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3. retro_nleu_2543 94.86 71.43
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Download FASTA sequences of all ENSNLEG00000013534 retrocopies