Parental gene:

ENSPPYG00000029876

Aliases:None
Description:None
Organism:Orangutan (Pongo abelii)
Coordinates:2a:74587755..74597500(-)


>ENSPPYG00000029876
ATGGCCCGTACTTTGGAACCACTAGCAAAGAAGATCTTTAAAGGAGTTTTGGTAGCCGAACTTGTAGGCGTTTTTGGAGC
ATATTTTTTGTTTAGCAAGATGCACACAAGCCAAGATTTCAGGCAAACAATGAGCAAGAAATATCCCTTCATCTTGGAAG
TTTATTACAAATCCACTGAGAAGTCTGGAATGTATGGAATCAGAGAGCTAGACCAAAAAACATGGTTGAACAGCAAAAAT
TAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .70 RPM
SRP007412_cerebellum 24 .32 RPM
SRP007412_heart 20 .68 RPM
SRP007412_kidney 22 .47 RPM
SRP007412_liver 15 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017579 ortholog_one2one 1 retrogene
retro_amel_629,
Choloepus hoffmanni ENSCHOG00000013008 ortholog_one2many 2 retrogenes
retro_chof_328, retro_chof_49,
Felis catus ENSFCAG00000023228 ortholog_one2one 2 retrogenes
retro_fcat_1289, retro_fcat_1750,
Homo sapiens ENSG00000218739 ortholog_one2one 2 retrogenes
retro_hsap_2312, retro_hsap_4294,
Gorilla gorilla ENSGGOG00000025368 ortholog_one2one 2 retrogenes
retro_ggor_1755, retro_ggor_2869,
Mus musculus ENSMUSG00000062691 ortholog_one2one 2 retrogenes
retro_mmus_426, retro_mmus_509,
Pan troglodytes ENSPTRG00000033858 ortholog_one2one 2 retrogenes
retro_ptro_1687, retro_ptro_2911,
Rattus norvegicus ENSRNOG00000040303 ortholog_one2one 2 retrogenes
retro_rnor_1144, retro_rnor_973,
Sus scrofa ENSSSCG00000020689 ortholog_one2one 2 retrogenes
retro_sscr_328, retro_sscr_434,
Tursiops truncatus ENSTTRG00000006884 ortholog_one2one 7 retrogenes
retro_ttru_1069, retro_ttru_1866, retro_ttru_1946, retro_ttru_274, retro_ttru_526, retro_ttru_57, retro_ttru_832,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_2045 72.13 76.25
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2. retro_pabe_3499 66.25 98.75
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Download FASTA sequences of all ENSPPYG00000029876 retrocopies