Parental gene:

TBCA, ENSPTRG00000017013

Aliases:None
Description:tubulin folding cofactor A [Source:HGNC Symbol;Acc:11579]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:5:37769874..37855023(+)


>ENSPTRG00000017013
ATGGCCGATCCTCGCGTGAGACAGATCAAGATCAAGACCGGCGTGGTGAAGCGGTTGGTCAAAGAAAAAGTGATGTATGA
AAAAGAGGCAAAACAACAAGAAGAAAAGATTGAAAAAATGAGAGCTGAAGATGGTGAAAATTATGACATTAAAAAGCAGG
CAGAGATCCTACAAGAATCCCGGATGATGATCCCAGATTGCCAGCGCAGGTTGGAAGCCGCATATTTGGATCTTCAACGG
ATACTAGAAAATGAAAAAGACTTGGAAGAAGCTGAGGAATATAAAGAAGCACGTTTAGTACTGGATTCAGTGAAGTTAGA
AGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 8 .87 RPM
SRP007412_cerebellum 1 .22 RPM
SRP007412_heart 0 .41 RPM
SRP007412_kidney 1 .26 RPM
SRP007412_liver 1 .37 RPM
SRP007412_testis 0 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014223 ortholog_one2many 4 retrogenes
retro_acar_11, retro_acar_130, retro_acar_142, retro_acar_195,
Callithrix jacchus ENSCJAG00000019848 possible_ortholog 4 retrogenes
retro_cjac_114, retro_cjac_2160, retro_cjac_2173, retro_cjac_2974,
Cavia porcellus ENSCPOG00000012187 ortholog_one2one 1 retrogene
retro_cpor_930,
Echinops telfairi ENSETEG00000016572 ortholog_one2one 1 retrogene
retro_etel_93,
Homo sapiens ENSG00000171530 ortholog_one2one 3 retrogenes
retro_hsap_3065, retro_hsap_346, retro_hsap_4667,
Macaca mulatta ENSMMUG00000011853 ortholog_one2many 1 retrogene
retro_mmul_229,
Mus musculus ENSMUSG00000042043 ortholog_one2one 3 retrogenes
retro_mmus_1486, retro_mmus_2839, retro_mmus_2970,
Otolemur garnettii ENSOGAG00000010198 ortholog_one2one 1 retrogene
retro_ogar_3193,
Ochotona princeps ENSOPRG00000002460 ortholog_one2one 4 retrogenes
retro_opri_550, retro_opri_727, retro_opri_879, retro_opri_91,
Pongo abelii ENSPPYG00000015579 ortholog_one2one 2 retrogenes
retro_pabe_2540, retro_pabe_350,
Rattus norvegicus ENSRNOG00000048342 ortholog_one2many 1 retrogene
retro_rnor_140,
Sorex araneus ENSSARG00000009943 ortholog_one2one 1 retrogene
retro_sara_699,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_274 84.95 86.11
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2. retro_ptro_2067 72.06 62.96
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Download FASTA sequences of all ENSPTRG00000017013 retrocopies