Parental gene: | ZSCAN4, ENSSTOG00000023779 |
| Aliases: | None |
| Description: | zinc finger and SCAN domain containing 4 [Source:HGNC Symbol;Acc:23709] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393707.1:482187..484015(+) |
>ENSSTOG00000023779
ATGCCTTCAAATCTCACAAACTCGTGTCAGTGTAAAACATCCCAGAATGATTTTGAATTAGGAAATACAGAATTCAGACG
AACCCAAGGATCCGCTGTCCAGAATGGAGAGATCTTCTCTGAGTTCTCAAGCTCTCAGCTCAACTCACTTCCAGACAACG
GTAACTCAAATGCAAGGAAGGAGCTGCAGAGACTCCATGGGATTTTTCACTCATGGTTGCAGCCGGAAAAGCATAGTAAG
GATGAGATTATTTCTCGATTGGTCCTGGAGCAGTTTATGATTAATGGAAACTGCAGGGACAGATCCATTTTGAAAGAGAA
ATGGGAATCAAGTGGACGAAACCTGGAGAAATTAATGGAAGACCTGACTGATGACTGCATGGAGCCACCAGTCTTAGTAC
GTGTTCACATGCAAGGACAGGAAGCCCTTTTTTCTGAGAATATGCCCTTAAAAGAAGTTATTGTTCATCTCAAAAAACAG
CTATCAGCAGAAAACACAACAGGAGAGAATAAAGGGATGTCCCTCCAGGCTCCTCAGGATACTCCCCTGGAGACAAGACA
AGGAAATGAAGATAAAGAAAATGCATGCAACAATTTCTGGAAAAATACTCAAGTAGATGACAGTATTACTTGTCAAGGGA
CTCAAACACCTTCCCTACTCATTATCCAGGAAGATCACTGTCTTCGGTTAGAAGATGGAGGTGCTTCTTGTGAGAACCCA
CACAACTCCAGAAGGGGAGTCACGTCTCACTCTGAGAAAGGGCCCCTGGAGGGACCTTCTTACCAAAACATCCCTGTGGG
GGAGCAACCAGAGTTTCTCCCCACCTCAGACCAGTCCTCCTCCGAGTTTGTCCCTGCCCACCAGAGCAATAAGGGAGACT
CCACGTGTGGGGGACACCATGAAAAATACCGTGGAGCTCAAAAGTCATACAAATGTAAGGAATGTCCCAAGATTTTTAGG
TATCTCTGTCACTTTTTAGCCCACCAGAGA
ATGCCTTCAAATCTCACAAACTCGTGTCAGTGTAAAACATCCCAGAATGATTTTGAATTAGGAAATACAGAATTCAGACG
AACCCAAGGATCCGCTGTCCAGAATGGAGAGATCTTCTCTGAGTTCTCAAGCTCTCAGCTCAACTCACTTCCAGACAACG
GTAACTCAAATGCAAGGAAGGAGCTGCAGAGACTCCATGGGATTTTTCACTCATGGTTGCAGCCGGAAAAGCATAGTAAG
GATGAGATTATTTCTCGATTGGTCCTGGAGCAGTTTATGATTAATGGAAACTGCAGGGACAGATCCATTTTGAAAGAGAA
ATGGGAATCAAGTGGACGAAACCTGGAGAAATTAATGGAAGACCTGACTGATGACTGCATGGAGCCACCAGTCTTAGTAC
GTGTTCACATGCAAGGACAGGAAGCCCTTTTTTCTGAGAATATGCCCTTAAAAGAAGTTATTGTTCATCTCAAAAAACAG
CTATCAGCAGAAAACACAACAGGAGAGAATAAAGGGATGTCCCTCCAGGCTCCTCAGGATACTCCCCTGGAGACAAGACA
AGGAAATGAAGATAAAGAAAATGCATGCAACAATTTCTGGAAAAATACTCAAGTAGATGACAGTATTACTTGTCAAGGGA
CTCAAACACCTTCCCTACTCATTATCCAGGAAGATCACTGTCTTCGGTTAGAAGATGGAGGTGCTTCTTGTGAGAACCCA
CACAACTCCAGAAGGGGAGTCACGTCTCACTCTGAGAAAGGGCCCCTGGAGGGACCTTCTTACCAAAACATCCCTGTGGG
GGAGCAACCAGAGTTTCTCCCCACCTCAGACCAGTCCTCCTCCGAGTTTGTCCCTGCCCACCAGAGCAATAAGGGAGACT
CCACGTGTGGGGGACACCATGAAAAATACCGTGGAGCTCAAAAGTCATACAAATGTAAGGAATGTCCCAAGATTTTTAGG
TATCTCTGTCACTTTTTAGCCCACCAGAGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000005419 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000011483 | ortholog_one2one | 11 retrogenes | |
| Equus caballus | ENSECAG00000015200 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000003257 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_408 | 55.09 | 98.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSTOG00000023779 retrocopies