RetrogeneDB ID: | retro_amel_296 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192377.1:885280..885901(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL14 | ||
Ensembl ID: | ENSAMEG00000001709 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.34 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | VFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVD-GPCTQVRRQAMPFKCMQLTDFILKFPHSARQ |
V.R.F.EVG.V.YVSFGP..GKLV.IV.V..QN..L...G.C.QVRR.A.PFK.MQ..DFILKFPHSA.Q | |
Retrocopy | VLRCFMEVGWVTYVSFGPPIGKLVGIVNVTAQNSTLAM<GLCSQVRRRALPFKSMQFIDFILKFPHSAGQ |
Parental | KYVRQAWQKADINTKWAATRWAKKIEARERK-AKMTDFDRYKVMKAKKMRNRIIKLEVRKLQKAALLKAS |
KY..QAWQKA.I.TKWAA.RWA..IEAR..K.AK.TD....KVMK.KKM.NR.....VRKL.KA.L...S | |
Retrocopy | KYAPQAWQKAGISTKWAAARWAT*IEARGKK>AKTTDIHHCKVMKVKKMGNR--QHHVRKL*KADLVNVS |
Parental | PKKAPAAKGAAAAAAAAKVPAKKMAAAGKKAPAQKVPAPKAAGQKAAPPKAQKGQKAPAQKAPAPKASGK |
PKK...AKGAA.AAAA.K.PAKKMA.AGK.APAQKVPAPKAAGQ.AAPP..Q.GQKAPAQKAPA.KASG. | |
Retrocopy | PKKTLSAKGAAMAAAA-KFPAKKMATAGKSAPAQKVPAPKAAGQNAAPPRSQEGQKAPAQKAPALKASGR |
Parental | KA |
KA | |
Retrocopy | KA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |