RetrogeneDB ID: | retro_sara_349 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_174972:5902..6221(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL14 | ||
Ensembl ID: | ENSSARG00000003974 | ||
Aliases: | None | ||
Description: | ribosomal protein L14 [Source:HGNC Symbol;Acc:10305] |
Percent Identity: | 67.59 % |
Parental protein coverage: | 57.22 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQK |
VFR.FVEV....YV.FG.HAGKLV...D.IDQN..LV...C.RVRRQ.MPF..MQ..DF.LKFPHSAR.K | |
Retrocopy | VFRSFVEVSGAPYV-FGRHAGKLVVVIDDIDQNQVLVGRRCSRVRRQTMPFTGMQHMDFFLKFPHSARPK |
Parental | YVRKAWEK-ADINTKWAATRWAKKIEARERKAKMTDFD |
.VRKAW.K.ADINTKWAA.RW.K..EARER.AKM...D | |
Retrocopy | HVRKAWGK>ADINTKWAAPRWVKQTEARERDAKMPGYD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |