RetrogeneDB ID: | retro_nleu_763 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397272.1:6446620..6447271(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL14 | ||
Ensembl ID: | ENSNLEG00000005682 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.49 % |
Parental protein coverage: | 74.15 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | PSFSPKAANMVFRRFVEVGRVAYVSFGPHAGKLVAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFI |
PSF.P.A.NMVFRRF.EV.RV.Y.S.GP.A.KLVA.VDVIDQNRALV.GPCTQVRRQ.MPFK.MQLTDF. | |
Retrocopy | PSFLPNATNMVFRRFMEVARVGYISSGPRARKLVATVDVIDQNRALVNGPCTQVRRQTMPFK*MQLTDFN |
Parental | LKFPHSARQKYVRQAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQ |
LKFPHSA.QKYV.QAWQKA.INTKWAATRWAKKIEARERKAKMTDFD.FKVMKA..MRNRIIKNEVKKLQ | |
Retrocopy | LKFPHSAHQKYV*QAWQKANINTKWAATRWAKKIEARERKAKMTDFDHFKVMKA--MRNRIIKNEVKKLQ |
Parental | KAALL-KASPKKAPGTKG-TAAAAAKVPAKKMTATSKKAPAQKVPAQKATGQKAAPAPKAQKG-QKAPAQ |
KAAL..KASPKKAP..KG.TAAAAA.....K...........................K...G.QKAPAQ | |
Retrocopy | KAALR<KASPKKAPSAKGATAAAAAAKVLAKNDRCGQEVSSSEASCPESHRPEGSSSSKSSEG>QKAPAQ |
Parental | KAPAPKASGKK |
KAPAPKA.GKK | |
Retrocopy | KAPAPKAFGKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |