Parental gene: | RPL14, ENSCJAG00000017884 |
| Aliases: | None |
| Description: | ribosomal protein L14 [Source:HGNC Symbol;Acc:10305] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 17:70874974..70879791(+) |
>ENSCJAG00000017884
ATGGTGTTCAGGCGCTTCGTGGAGGTTGGCCGGGTGGCCTACGTCTCCTTTGGACCTCATGCCGGAAAGTTGGTGGCGAT
TGTAGATGTTATTGATCAAAACAGGGCTTTGGTTGATGGACCTTGCACTCAGGTGAGGAGACAGGCCATGCCTTTCAAGT
GCATGCAGCTCACTGATTTCATCCTCAAGTTTCCACACAGTGCCCGCCAGAAGTATGTCCGGCAAGCCTGGCAGAAGGCA
GACATCAATACGAAATGGGCAGCCACTCGATGGGCCAAGAAGATTGAAGCCAGAGAAAAGAAAGCCAAGATGACAGATTT
TGATCGTTTTAAAGTTATGAAGGCAAAGAAAATGAGGAACAGAATAATCAAGAATGAAGTTAAGAAGCTTCAAAAGGCAG
CTCTCCTGAAAGCTTCTCCCAAAAAAGCACCCGCTGCTAAGGCTGCTGCTGCAGCTGCCGCTCAAGTCCCAGCTAAAAAG
ATGACCGCCGCAGGCAAGAGGGCTCCTGCCCAGAAGGCCACAGGCCAGAAGGCTCCTGCCCAGAAGGCCACAGGCCAGAA
GGCAGCGCCTGCTCCAAAAGCTGAGAAGGGTCAAAAAGCTCCAGCCAAGAAAGCACCTGCTCCAAAGGCATCTGGCAAGA
AAGCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 106 .63 RPM |
| SRP051959_heart | 111 .64 RPM |
| SRP051959_kidney | 140 .06 RPM |
| SRP051959_liver | 135 .51 RPM |
| SRP051959_lung | 168 .58 RPM |
| SRP051959_lymph_node | 249 .78 RPM |
| SRP051959_skeletal_muscle | 92 .46 RPM |
| SRP051959_spleen | 202 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000001709 | ortholog_one2one | 4 retrogenes | |
| Canis familiaris | ENSCAFG00000005138 | ortholog_one2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000000711 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000026813 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000012894 | ortholog_one2many | 6 retrogenes | |
| Felis catus | ENSFCAG00000015655 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000188846 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000025958 | ortholog_one2many | 3 retrogenes | |
| Latimeria chalumnae | ENSLACG00000015639 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000009217 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000014429 | ortholog_one2one | 4 retrogenes | |
| Monodelphis domestica | ENSMODG00000015262 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000017961 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000025794 | ortholog_one2one | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005682 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000010309 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000011963 | ortholog_one2one | 4 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000013914 | ortholog_one2one | 7 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019007 | ortholog_one2many | 4 retrogenes | |
| Sorex araneus | ENSSARG00000003974 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001591 | ortholog_one2one | 5 retrogenes | |
| Sus scrofa | ENSSSCG00000011272 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000002161 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000006708 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000022018 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_630 | 84.26 | 100.00 | Please wait, loading  |
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| 2. | retro_cjac_1249 | 86.06 | 95.35 | Please wait, loading |
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| 3. | retro_cjac_1393 | 76.07 | 53.95 | Please wait, loading |
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| 4. | retro_cjac_1835 | 70.50 | 63.26 | Please wait, loading |
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| 5. | retro_cjac_2138 | 68.83 | 70.23 | Please wait, loading |
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| 6. | retro_cjac_2139 | 72.96 | 72.56 | Please wait, loading |
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| 7. | retro_cjac_2332 | 72.94 | 77.21 | Please wait, loading |
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| 8. | retro_cjac_2797 | 77.27 | 51.16 | Please wait, loading |
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| 9. | retro_cjac_3240 | 74.05 | 84.65 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000017884 retrocopies