RetrogeneDB ID: | retro_shar_539 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL849858.1:3427317..3427708(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL14 | ||
Ensembl ID: | ENSSHAG00000001591 | ||
Aliases: | None | ||
Description: | ribosomal protein L14 [Source:HGNC Symbol;Acc:10305] |
Percent Identity: | 55.73 % |
Parental protein coverage: | 74.14 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | LVDGPCSGVRRQAMPFKCMQLTDFVLKFPHSARQKYVRAAWEKEKINTKWKATRWAKKIEARERKAKMTD |
LV.G.CSG...QAMPFKCMQ.T.F..KFP.S..Q..V.A..EKE.I..KW.A..W.KKIE.RERKAKMTD | |
Retrocopy | LVKGGCSGMKNQAMPFKCMQFTNFIFKFPYSTCQQHVLAI*EKENIRLKWTAIGWVKKIETRERKAKMTD |
Parental | FDRYKVMKAK-KMRNRIIKHEVKKLQKASTQKGSPKKGATQK-ALASKVSAKKIPAKKAEG |
FD..KV.KA..K..N..IKHE.KK..K....K...K...TQK.A...K..A.KI..KK..G | |
Retrocopy | FDH*KVVKAR>KLENKVIKHEMKKMRKSFSLKETLKMECTQKRAPVPKILANKISTKKMLG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |