RetrogeneDB ID: | retro_dord_64 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | GeneScaffold_1803:26049..26285(+) | ||
Located in intron of: | ENSDORG00000014570 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | Gm6531 | ||
Ensembl ID: | ENSDORG00000003764 | ||
Aliases: | None | ||
Description: | predicted gene 6531 [Source:MGI Symbol;Acc:MGI:3643620] |
Percent Identity: | 76.25 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MSHKQIYYSDKYDDEEFEYRHVMLPKDIAKLVPKTHLMSESEWRNLGVQQ-SQGWVHYMIHEPEPHILLF |
MS.K.IY...KY.DEEFEY.HVM.PK.IAKLV..THLMSESEWRNLG.QQ..QG..HYM.HEPEPHILLF | |
Retrocopy | MSYK*IYHLEKYHDEEFEYWHVM*PKNIAKLVSRTHLMSESEWRNLGAQQ<DQGCIHYMMHEPEPHILLF |
Parental | RRPLPNKPKK |
.RP.PNKPKK | |
Retrocopy | QRPIPNKPKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |