RetrogeneDB ID: | retro_etel_1098 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_211068:1431..1694(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 65.96 % |
Parental protein coverage: | 97.83 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 4 |
Parental | MAKRTKKVGIVGKYGT-RYGASLRKMVKKIEISQHAKYTCSFCGKTKMK-RRAVGIWH-CGSCMKTVAGG |
MAKRT.KVGIVG..GT.RYGASLR.MVK..E.S.HAK.T.S.CG.TK...RRAVGI...CGSC.KT.AGG | |
Retrocopy | MAKRTTKVGIVGEHGT<RYGASLRSMVKESETSRHAKHTGSSCGRTKKR<RRAVGICA<CGSCVKTGAGG |
Parental | AWTYNTTSAVTVKSAI-RRLKELK |
.......SAV.VKSA..RRLK.LK | |
Retrocopy | L-DLQYPSAVPVKSAV<RRLKGLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |