RetrogeneDB ID: | retro_pcap_185 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_142680:1827..2072(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSPCAG00000006891 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 66.27 % |
Parental protein coverage: | 89.13 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTK-MKRRAVGIWHCGSCMKTVAGGAWTYNTTSAVTV |
.G..G...GASL.KMVKK.EISQ.....CSFCGKTK.MKR.AV.I..CGSC..TV.G.AWT..T.S.VTV | |
Retrocopy | IG*HGMCHGASLGKMVKKGEISQPTGHSCSFCGKTK<MKRCAVSI*PCGSCTETVVGSAWTDITPSVVTV |
Parental | KSAIRRLKELKDQ |
KSA.RRLKELK.Q | |
Retrocopy | KSAVRRLKELKEQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |