RetrogeneDB ID: | retro_pcap_414 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_7786:33705..33962(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSPCAG00000006891 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 51.72 % |
Parental protein coverage: | 93.48 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | KVGIVGKYGTRYGAS-LRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTVAGGAWTYNTTS |
.VG..G......G.S.L.KMVKK..I..H.K.TC.FCGKTK..R..V.I.H.GS.M.T.A..AWTY...S | |
Retrocopy | QVGTNGRELNSTGTS<LWKMVKKAGIGPHTKHTCTFCGKTKLERLPVSILHRGSRMNTPARSAWTYGAAS |
Parental | AVTVKSAIRRLKELKDQ |
AVT.K...R.LKE...Q | |
Retrocopy | AVTEKATLR*LKEMESQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |