RetrogeneDB ID: | retro_etel_1977 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_321400:1204..1477(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 82.11 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAKRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMKTV-AGGAW |
MAK.TKKVGIVGK.GTR.GA.LR.MVKK.EISQHAKYTCSFCGKTKM.RRAVGIW.CGSC.K...A.GAW | |
Retrocopy | MAKCTKKVGIVGK*GTRFGAPLRNMVKKNEISQHAKYTCSFCGKTKMRRRAVGIWQCGSCVKKE<AAGAW |
Parental | TYNT-TSAVTVKSAIR-RLKELKDQ |
TYNT..SAVTVKSAIR.RLKELK.Q | |
Retrocopy | TYNT<PSAVTVKSAIR<RLKELKGQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |