RetrogeneDB ID: | retro_etel_1426 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_263612:4532..4796(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37A | ||
Ensembl ID: | ENSETEG00000014352 | ||
Aliases: | None | ||
Description: | ribosomal protein L37a [Source:HGNC Symbol;Acc:10348] |
Percent Identity: | 54.44 % |
Parental protein coverage: | 95.65 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVG-IWHCGSC-MKTVAGGAWT |
K...KV.IVG.Y.T.YG.SL.KMVKKIEISQHAKY.C.F..KT...R.AVG.I.HC.S..M.....G..T | |
Retrocopy | KLIQKVRIVGQYWTWYGVSLTKMVKKIEISQHAKYSCFF*SKTTRRRSAVG>IRHCSSS<MEPASDGNCT |
Parental | YNTTSAVTVKSAIRRLKELK |
YNT.SA.........L..LK | |
Retrocopy | YNTISARSLPGDQ*TLHDLK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |