RetrogeneDB ID: | retro_etel_502 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_8374:15633..15886(-) | ||
Located in intron of: | ENSETEG00000015882 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | DNAJC8 | ||
Ensembl ID: | ENSETEG00000008348 | ||
Aliases: | None | ||
Description: | DnaJ (Hsp40) homolog, subfamily C, member 8 [Source:HGNC Symbol;Acc:15470] |
Percent Identity: | 82.35 % |
Parental protein coverage: | 54.25 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KRFRQLSILVHPDKNQDDADRAQKAFEAVDKAYKLLLDQEQKKRALDVIQAGKEYV-XXXVKER-KKQLK |
KR..QLSILVHPDKNQD.AD.AQK.FEAVDKAYKLLLD.EQKKRAL.VIQAGKE.V....VKER.KKQLK | |
Retrocopy | KRYPQLSILVHPDKNQDGADKAQKVFEAVDKAYKLLLDPEQKKRALGVIQAGKEWVEQHTVKER>KKQLK |
Parental | KEGKPTNVEEDDPEL |
K.GKPTNVEE.DPEL | |
Retrocopy | KAGKPTNVEEVDPEL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |