RetrogeneDB ID: | retro_etel_658 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_133968:213..561(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000015788 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL15 | ||
Ensembl ID: | ENSETEG00000015044 | ||
Aliases: | None | ||
Description: | ribosomal protein L15 [Source:HGNC Symbol;Acc:10306] |
Percent Identity: | 78.45 % |
Parental protein coverage: | 66.29 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | PDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALR |
P...RR.GYK.KQGYVIY..RVR.G..K.P.PKGATYGK.VHHGVNQLKFA.SLQSVAEE.AGRHCG..R | |
Retrocopy | PNMVRRQGYKVKQGYVIYWTRVRHGSCKCPGPKGATYGKHVHHGVNQLKFA*SLQSVAEEQAGRHCGDQR |
Parental | VLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHRE |
V.NSYWVGED.TY.FF.VILI.PFHKAI.RNPDTQ.ITKPV.KHRE | |
Retrocopy | VVNSYWVGEDFTYNFFKVILIVPFHKAIKRNPDTQCITKPVYKHRE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |