RetrogeneDB ID: | retro_meug_1152 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold308381:303..611(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 52.34 % |
Parental protein coverage: | 79.55 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | EATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAV-NISRNLKDL-N |
..TE.A........QD..SKMAT.L...LTAT.EDY..L.N.NK..S.KYLEMK.I.V.N...NLKD... | |
Retrocopy | QMTEKAIDYLVDVHQDIVSKMAT*L---LTATREDYNVLGNVNKPMSWKYLEMKNITV>NFCINLKDK>S |
Parental | QKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
.....L.....Q.TLIEE.V.ALE...YKLD.YSKKL | |
Retrocopy | KNELGLGSRMHQLTLIEE*VSALEKSVYKLDVYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |