RetrogeneDB ID: | retro_meug_1629 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold495062:607..875(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 78.95 % |
Parental protein coverage: | 70.45 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | DDAVVETAEEATEPAEADITELCQDMFSKMAT-YLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVNI |
DDAVV..A.EATEP.EADIT..CQD.FS.MAT..LTGELT.TSEDY.LLENMNKLTSLKY....DIAV.I | |
Retrocopy | DDAVVKMAKEATEPTEADITGPCQDTFS*MAT<HLTGELTITSEDY*LLENMNKLTSLKY---QDIAVKI |
Parental | SRNLKD-LNQKYAALQPYLDQITLI |
SRNLKD.LNQK..ALQPYLDQITLI | |
Retrocopy | SRNLKD<LNQKCTALQPYLDQITLI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |