RetrogeneDB ID: | retro_meug_2007 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold78776:5105..5437(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 68.97 % |
Parental protein coverage: | 86.36 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 2 |
Parental | DDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLEN-MNKLTSLKYLEMKDIAVNI |
D.AVVETA.E....A.A..T.L.QD.F.KMA.YLT.EL..T.EDYKLLEN..NKLTSLKYLEMKDIAVNI | |
Retrocopy | DKAVVETAQE----AKANTTRLYQDVFTKMAVYLTDELASTIEDYKLLEN>KNKLTSLKYLEMKDIAVNI |
Parental | SRNLKDLNQKYAA-LQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
SRNL..LN...AA.L..YL..ITL...QVAALE.A.YK.DAYSKKL | |
Retrocopy | SRNLEGLN*QSAA>LEFYLY*ITLTG*QVAALEEAGYKWDAYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |