RetrogeneDB ID: | retro_meug_1324 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold368160:1002..1345(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 78.26 % |
Parental protein coverage: | 86.36 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | DDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVNIS |
DDAVVETAEE..EP..A.I..L.QDMF.KMA.YLT..LTAT.ED.KLLENMN.LTSLKYLEMK.IAVN.. | |
Retrocopy | DDAVVETAEETMEPSKAGIMGLDQDMFYKMAIYLTSQLTATRED*KLLENMNNLTSLKYLEMKAIAVNVR |
Parental | RNLKDLNQKYAA-LQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
RNLKDLN.KYAA.LQPYL.QITL.EEQ.AALEQ.AYKL.AYSKKL | |
Retrocopy | RNLKDLNRKYAA>LQPYLNQITLYEEQGAALEQTAYKLGAYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |