RetrogeneDB ID: | retro_meug_153 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | GeneScaffold_45:1..280(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 86.02 % |
Parental protein coverage: | 70.45 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | DDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVNIS |
D.AVVETA.EATEPAEADIT.LCQDMFSKMA.YLTGELT.T.ED.KLL.NMNKLTSLKYLEMKDIAVNIS | |
Retrocopy | DNAVVETA*EATEPAEADITGLCQDMFSKMAAYLTGELTDTREDNKLLKNMNKLTSLKYLEMKDIAVNIS |
Parental | RNLKDLNQKYAALQPYLDQITLI |
RN.KD.NQKYA..QPYLD.ITLI | |
Retrocopy | RNRKDFNQKYATHQPYLDEITLI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |