RetrogeneDB ID: | retro_meug_329 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold102064:3780..4176(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 76.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAATAEGVPAAQREGLGRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMN |
MA..A....A.QR..LGRD.A.VETAE.A.EP.E.DI..LC..MFS.MATYLT.ELTATS.DYKLLENM. | |
Retrocopy | MATMATSDAAGQRDSLGRDEAMVETAEKAMEPTEVDIMGLCLEMFSTMATYLTDELTATSDDYKLLENMS |
Parental | KLTSLKYLEMKDIAVNISRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
KLT.LKYLEMKDIAVNISRNLKDLNQKYAAL..YLDQITLIEEQV...EQ.AYK.DAYSKKL | |
Retrocopy | KLTNLKYLEMKDIAVNISRNLKDLNQKYAALLLYLDQITLIEEQVVTFEQVAYKWDAYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |