RetrogeneDB ID: | retro_meug_841 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold20491:1043..1386(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 73.91 % |
Parental protein coverage: | 86.36 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | DDAVVETAEEATEPAEADITELCQDMFSKMATYLTG-ELTATSEDYKLLENMNKLTSLKYLEMKDIAVNI |
DDA.VE...E.TEP.EADI..L..D.F.KMATY..G.ELT.TSEDY.LLEN.NKLT.LKYLEMK.I.VNI | |
Retrocopy | DDAMVEMGQESTEPKEADILVLYHDVFPKMATYPMG>ELTTTSEDYELLENVNKLTNLKYLEMKGIEVNI |
Parental | SRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
SRNLKDLNQKYA.LQPY.D.I.LIEE.VAA.EQAA.KLD..SKKL | |
Retrocopy | SRNLKDLNQKYAVLQPYKDWIALIEE*VAAFEQAACKLDSCSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |