RetrogeneDB ID: | retro_meug_711 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold16583:28361..28697(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BLOC1S2 | ||
Ensembl ID: | ENSMEUG00000003630 | ||
Aliases: | None | ||
Description: | biogenesis of lysosomal organelles complex-1, subunit 2 [Source:HGNC Symbol;Acc:20984] |
Percent Identity: | 75.86 % |
Parental protein coverage: | 87.88 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | GRDDAVVETAEEATEPAEADITELCQDMFSKMATYLTGELTATSEDYKLLENMNKLTSLKYLEMKDIAVN |
G.DDAVVETA.EA.EP...DIT..CQ..FSKM.TY....LTATS..YKLLENMNK.TSLKYLE.K.I.VN | |
Retrocopy | GLDDAVVETAMEAMEPTKVDITGVCQNVFSKMTTY----LTATS*GYKLLENMNKVTSLKYLEIKNITVN |
Parental | ISRNLKDLNQKYAALQPYLDQITLIEEQVAALEQAAYKLDAYSKKL |
I.RNLKDL.QKYA.LQPYLD.I.LIEEQ.AALEQAA.KLDAYSKKL | |
Retrocopy | ICRNLKDLDQKYATLQPYLD*ISLIEEQIAALEQAAFKLDAYSKKL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |