RetrogeneDB ID: | retro_tsyr_2052 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_8397:20349..20792(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSTSYG00000009492 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 85.23 % |
Parental protein coverage: | 51.04 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | ASITPGTILIILTGRHRGKRVVF-LKQLGSGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKVPK |
A.IT.GTILIILT..HRGKRVVF....LGSGLLLVTG.LVLNRVPLRRTHQKFVIATSTKIDISNVK.PK | |
Retrocopy | ANITLGTILIILTWCHRGKRVVFPQRKLGSGLLLVTGFLVLNRVPLRRTHQKFVIATSTKIDISNVKIPK |
Parental | HLTDAYFKK-KQLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTN |
HLTDAYFKK.K.L.KPRHQEGEI.DTEKEKYEITEQ.KID.KAVD.QILPKIKA.P.LQG.L.SVFALTN | |
Retrocopy | HLTDAYFKK<KRLWKPRHQEGEICDTEKEKYEITEQCKID*KAVDAQILPKIKAVPPLQG*L*SVFALTN |
Parental | GVYPHKLVF |
G.YPHKLVF | |
Retrocopy | GIYPHKLVF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |