RetrogeneDB ID: | retro_tsyr_2123 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_9317:37553..37987(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL6 | ||
Ensembl ID: | ENSTSYG00000009492 | ||
Aliases: | None | ||
Description: | ribosomal protein L6 [Source:HGNC Symbol;Acc:10362] |
Percent Identity: | 87.07 % |
Parental protein coverage: | 50.69 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | SITPGTILIILTGRHRGKR-VVFLKQLGSGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKVPKH |
SITP.TILIILTG.HRGK..VVFLKQLGSGLLLVTG.L..NRVPLR.THQKFVIATSTKIDISN.K.PKH | |
Retrocopy | SITPRTILIILTGCHRGKG<VVFLKQLGSGLLLVTGSLIFNRVPLR-THQKFVIATSTKIDISNMKIPKH |
Parental | LTDAYFKKKQLRKPRHQEGEIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTNGV |
LTDAYFKKK.L.KPRHQ.GEI.DT.KEKYEITEQ..IDQKAVDSQILPKIKAIPQLQG.LRSVFALTNGV | |
Retrocopy | LTDAYFKKKKLQKPRHQDGEILDTVKEKYEITEQCEIDQKAVDSQILPKIKAIPQLQGCLRSVFALTNGV |
Parental | YPHKLVF |
YPHK.VF | |
Retrocopy | YPHKFVF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |